Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_028234.1 Length=12162 Score E Sequences producing significant alignments: (Bits) Value seq2708 145 6e-31 >seq2708 Length=213413 Score = 145 bits (160), Expect = 6e-31 Identities = 227/322 (70%), Gaps = 2/322 (1%) Strand=Plus/Minus Query 7423 AGGTAGAtttttttCTCTAATGACTTGG-AGATTGAGAGAATACTTTGTTGCAACTGAAT 7481 ||| ||||||||| | | ||| | ||| ||||| |||| |||||||| ||||||| Sbjct 50336 AGGAAGATTTTTTGCATTGATGTCCTGGCAGATTC-GAGAGTACTTTGTGATGACTGAAT 50278 Query 7482 TCCTGATTAAAAAACATTTTGTCCCTCTATTTGAGGGACTAACTATGGCAGATGATTTGA 7541 |||||| || |||||||| || | || |||| || ||| |||| |||||| | | Sbjct 50277 ACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAA 50218 Query 7542 TCACAGTTGTGaaaaaaaTGATTCGAAACTCAAATGGACAAGGATTAAATGATTACAGTA 7601 |||||| || |||||||||| | ||| |||||||||| | |||||| | Sbjct 50217 CCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGAAA 50158 Query 7602 GAATAACTATAGCAAATCATATTGATTATGAAAAGTGGAATAATCATCAAAGAAAGGAAT 7661 | || || || |||||| | || || || || |||||||||||||| || || || | Sbjct 50157 CTGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAGT 50098 Query 7662 CAAATAAATATGTTTTTAAAGTTATGGGGCAATTCTTAGGTTATCCTAATTTAATTGTCA 7721 ||| | || || | ||||||||||||||| | || |||||| | ||||| Sbjct 50097 CAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCACTC 50038 Query 7722 GAACCCATGAGTTTTTTGAAAA 7743 | || |||||| | |||||||| Sbjct 50037 GGACACATGAGATATTTGAAAA 50016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38801756811984