Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_028235.1 Length=12994 Score E Sequences producing significant alignments: (Bits) Value seq2708 89.7 4e-14 >seq2708 Length=213413 Score = 89.7 bits (98), Expect = 4e-14 Identities = 165/240 (69%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 8260 TGAAGAGAATTGGGAGAtttttttCATTAATGTCTTGGGAGTTGAGAGAATATTTTGTAT 8319 |||||| || || ||||||||| |||| ||||| ||| || | |||| || ||||| Sbjct 50346 TGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGA 50287 Query 8320 ATACAGAGTATTTAATAAAGGAGTATTTTGTTCCATTATTCCATGGCTTGACCATGGCAG 8379 || || || | || ||| | ||||||||||||| ||| | || |||| |||| | Sbjct 50286 TGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTG 50227 Query 8380 ATGACCTGCAGGAAGTTATTAAGAAAATGTTGGAGAATGTAAGTGGACAAGGGTTGGA-- 8437 |||| || ||| || |||||| | |||| ||||||||| ||| Sbjct 50226 ATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGG--AGGATC 50169 Query 8438 TAATTACGAGTATATATCAATTGCGAATCATATTGATTATGAAAAATGGAACAATCATCA 8497 | |||| || | | | |||||||||||| | || || || |||||||| |||||||| Sbjct 50168 TGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCA 50109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41464057790672