Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_028235.1
Length=12994
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 89.7 4e-14
>seq2708
Length=213413
Score = 89.7 bits (98), Expect = 4e-14
Identities = 165/240 (69%), Gaps = 4/240 (2%)
Strand=Plus/Minus
Query 8260 TGAAGAGAATTGGGAGAtttttttCATTAATGTCTTGGGAGTTGAGAGAATATTTTGTAT 8319
|||||| || || ||||||||| |||| ||||| ||| || | |||| || |||||
Sbjct 50346 TGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGA 50287
Query 8320 ATACAGAGTATTTAATAAAGGAGTATTTTGTTCCATTATTCCATGGCTTGACCATGGCAG 8379
|| || || | || ||| | ||||||||||||| ||| | || |||| |||| |
Sbjct 50286 TGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTG 50227
Query 8380 ATGACCTGCAGGAAGTTATTAAGAAAATGTTGGAGAATGTAAGTGGACAAGGGTTGGA-- 8437
|||| || ||| || |||||| | |||| ||||||||| |||
Sbjct 50226 ATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGG--AGGATC 50169
Query 8438 TAATTACGAGTATATATCAATTGCGAATCATATTGATTATGAAAAATGGAACAATCATCA 8497
| |||| || | | | |||||||||||| | || || || |||||||| ||||||||
Sbjct 50168 TGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCA 50109
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 41464057790672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |