Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_028239.1
Length=16133
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 172 6e-39
>seq2708
Length=213413
Score = 172 bits (190), Expect = 6e-39
Identities = 274/389 (70%), Gaps = 8/389 (2%)
Strand=Plus/Minus
Query 11300 GCTAAAGAGAGGGAATTGAAAGATGCTGGGAGGtttttttCATTAATGAGCTGGGAGCTG 11359
|| || ||| |||| ||||| | || || |||||| |||| ||| |||| || |
Sbjct 50362 GCGAAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATT 50303
Query 11360 AGGGAGTACTTCGTATTTACTGAATACCTAATTAAAGAGCATTTTGTACCATTATTTAAG 11419
| |||||||| || | ||||||||||| || || ||||||||| ||||| || |||
Sbjct 50302 CGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAG 50243
Query 11420 GGTCTGACTATGGCTGATGACTTACAAACAGTTATTAAGAAGATGATAGATGTGTCTTCT 11479
||||||||| |||||||||| || ||||| || || ||||| || || ||
Sbjct 50242 GGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCT 50183
Query 11480 GGTCA---AGGCACTGAGACATATGAGAATATCACCATTGCAAATAACATAGATTATGAG 11536
|| || ||| |||| ||||| | | |||||||||| ||| | |||| || |||
Sbjct 50182 GGACAAGGAGGATCTGA---TTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAG 50126
Query 11537 AAATGGAATAATTATCAAAGGTATGAATCTAATCATGCAATATTCACAGTGATGGGGCAA 11596
|||||||||||| |||| ||| | || || | | || |||||| || |||||||||
Sbjct 50125 AAATGGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAA 50066
Query 11597 TTTTTAGGGTATCCAAAGTTAATTGCAAGAACTCATGAGTTTTTTGAGAAAAGCCTAG-T 11655
|| | || ||||| | ||||| | | || |||||| | ||||| ||| | | | |
Sbjct 50065 TTCCTTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGA-AAAGTCATGGAT 50007
Query 11656 TTATTATAACCAAAGACCTGACTTAATGA 11684
||||| ||| | || ||| |||||||
Sbjct 50006 CTATTACAACAATAGGGGTGATTTAATGA 49978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 51505231105088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |