Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_028246.1
Length=14627
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 127 2e-25
>seq2708
Length=213413
Score = 127 bits (140), Expect = 2e-25
Identities = 239/349 (68%), Gaps = 2/349 (1%)
Strand=Plus/Minus
Query 9770 AGCTAAAGAGAGAGAATTAAAGATAGAAGGTAGAtttttttCATTGATGTCATATGACAT 9829
||| || ||| | || || |||| ||| ||||||||| |||||||||| | | ||
Sbjct 50363 AGCGAAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGAT 50304
Query 9830 GAGGGATTACTTCGTAATGACTGAATATTTGATaaaaaaaTATTATGTACCATTATTCAA 9889
| || ||||| || ||||||||||| |||| || ||| ||| ||||| |||||
Sbjct 50303 TCGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAA 50244
Query 9890 AGGATTGACCATGGCTGATGATCAAAATACAGTAGTAAAGAAAATGCTCAAAGTTTCTAA 9949
|| |||| |||||||||||| || ||||| | |||||| | | ||
Sbjct 50243 GGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGC 50184
Query 9950 AGGTCAAGGGCTAACAGATTATAAAGAGATAACATTTGCTAATCACTTGGATTATGAGAA 10009
|| ||||| | | |||||| || | || |||| ||||| | || || |||||
Sbjct 50183 TGGACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAA 50124
Query 10010 GTGGAATAATTATCAAAGGAGGGAATCAAACGGTCCGGTGTTCAGAGTAATGGGCCAGTT 10069
||||||||| |||| |||| || |||| | || || ||||| || ||||| || ||
Sbjct 50123 ATGGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATT 50064
Query 10070 TTTAGGTCTA-CCTCACTTAATAGAAAGAACTCACGAGTTCTTTGAAAA 10117
| || ||| ||||||||||| | || || ||| | ||||||||
Sbjct 50063 CCTTGG-CTATCCTCACTTAATCACTCGGACACATGAGATATTTGAAAA 50016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 46686215322020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |