Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_031079.1
Length=11843
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 100 2e-17
>seq2708
Length=213413
Score = 100 bits (110), Expect = 2e-17
Identities = 204/303 (67%), Gaps = 0/303 (0%)
Strand=Plus/Minus
Query 6789 GAAGGAAAGGGAGATCAAGAAGAATGGGAGGTTCTTCGCACTCATGTCCTGGGACCTTCG 6848
|||||| ||||| | |||| | || || || || ||| | ||||||||| | ||||
Sbjct 50360 GAAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCG 50301
Query 6849 GGAGTACTTTGTATCCACTGAATATCTTATTAAAATGTTCTATGTCCCTTTGTTCCAAGG 6908
||||||||||| |||||||| || || || || | ||| || |||||| | ||
Sbjct 50300 AGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGG 50241
Query 6909 TCTGACCATGGCGGATGATCTGAACTCTGTCACCAAAAAGATCCTTGGGTGCACCTTCGG 6968
|||||| |||| |||||||| | | | || | ||| || ||| | || | ||
Sbjct 50240 TCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGG 50181
Query 6969 TCAAGGGCTTGCAGGGTACACTGCAGTTACATTCACTAACCACCTAGATTACGAAAAGTG 7028
||||| | | || | || || | | || || |||| ||||| || ||
Sbjct 50180 ACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAATG 50121
Query 7029 GAACAACCATCAGAGGCGGGAGGCCACTGACCCGGTTTTCAGAGTGATGGGTCAGTTCTT 7088
||| || ||||||||| ||| | || ||||| || ||||| || ||||| || ||| |
Sbjct 50120 GAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCT 50061
Query 7089 TGG 7091
|||
Sbjct 50060 TGG 50058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 37780994778088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |