Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_031215.1
Length=12291
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 147 2e-31
>seq2708
Length=213413
Score = 147 bits (162), Expect = 2e-31
Identities = 270/394 (69%), Gaps = 4/394 (1%)
Strand=Plus/Minus
Query 7329 agagaaggagagagagaTCAAAATTAACGGTCGTTTTTTCTCTCTGATGTCATGG--GAT 7386
|| ||||||| | ||| | || | || || | ||||| | ||||||| ||| |||
Sbjct 50363 AGCGAAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGAT 50304
Query 7387 TTGAGAGATTACTTTGTGATAACTGAATATCTAATCAAGACACATTTTGTCCCTCTTTTC 7446
| ||||| ||||||||||| |||||||| || |||||| |||||||| || | |||
Sbjct 50303 TCGAGAG--TACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTC 50246
Query 7447 TATGGTCTAACTATGGCCGATGATATGACGACCGTTGTGAGGAAGATGATGGAGAATACT 7506
| ||||| ||| |||| |||||| | || || || || || ||||| |||| |
Sbjct 50245 AAGGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCG 50186
Query 7507 AGCGGTCAGGGCTCTGATGATTATGAACACATCGGAATTGCAAACCACCTTGATTACGAA 7566
|| || || |||||||||| || ||||| || || | || |||||
Sbjct 50185 GCTGGACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAG 50126
Query 7567 AAATGGAACAACCATCAGAGATATCAGTCCACTGAGCCGGTATTTACGGTGATGGGAAAG 7626
|||||||| || |||||||| | |||| || || || ||||| | ||| ||||| |
Sbjct 50125 AAATGGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAA 50066
Query 7627 TTTTTGGGTTATCCTAATTTGATTGCCAGGACCCATGAGTTCTTTGAAAAGAGTTTTATC 7686
|| | || |||||| | || || | |||| |||||| | ||||||||| | |||
Sbjct 50065 TTCCTTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGAAAAGTCATGGATC 50006
Query 7687 TATCACGGAGGCAGAGCAGATTTAATGAAAGTTG 7720
||| || || | |||||||||| | |||
Sbjct 50005 TATTACAACAATAGGGGTGATTTAATGACAATTG 49972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 39214541458920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |