Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_031215.1 Length=12291 Score E Sequences producing significant alignments: (Bits) Value seq2708 147 2e-31 >seq2708 Length=213413 Score = 147 bits (162), Expect = 2e-31 Identities = 270/394 (69%), Gaps = 4/394 (1%) Strand=Plus/Minus Query 7329 agagaaggagagagagaTCAAAATTAACGGTCGTTTTTTCTCTCTGATGTCATGG--GAT 7386 || ||||||| | ||| | || | || || | ||||| | ||||||| ||| ||| Sbjct 50363 AGCGAAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGAT 50304 Query 7387 TTGAGAGATTACTTTGTGATAACTGAATATCTAATCAAGACACATTTTGTCCCTCTTTTC 7446 | ||||| ||||||||||| |||||||| || |||||| |||||||| || | ||| Sbjct 50303 TCGAGAG--TACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTC 50246 Query 7447 TATGGTCTAACTATGGCCGATGATATGACGACCGTTGTGAGGAAGATGATGGAGAATACT 7506 | ||||| ||| |||| |||||| | || || || || || ||||| |||| | Sbjct 50245 AAGGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCG 50186 Query 7507 AGCGGTCAGGGCTCTGATGATTATGAACACATCGGAATTGCAAACCACCTTGATTACGAA 7566 || || || |||||||||| || ||||| || || | || ||||| Sbjct 50185 GCTGGACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAG 50126 Query 7567 AAATGGAACAACCATCAGAGATATCAGTCCACTGAGCCGGTATTTACGGTGATGGGAAAG 7626 |||||||| || |||||||| | |||| || || || ||||| | ||| ||||| | Sbjct 50125 AAATGGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAA 50066 Query 7627 TTTTTGGGTTATCCTAATTTGATTGCCAGGACCCATGAGTTCTTTGAAAAGAGTTTTATC 7686 || | || |||||| | || || | |||| |||||| | ||||||||| | ||| Sbjct 50065 TTCCTTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGAAAAGTCATGGATC 50006 Query 7687 TATCACGGAGGCAGAGCAGATTTAATGAAAGTTG 7720 ||| || || | |||||||||| | ||| Sbjct 50005 TATTACAACAATAGGGGTGATTTAATGACAATTG 49972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39214541458920