Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_031240.1
Length=11541
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 194 1e-45
>seq2708
Length=213413
Score = 194 bits (214), Expect = 1e-45
Identities = 276/386 (72%), Gaps = 2/386 (1%)
Strand=Plus/Minus
Query 6457 AGAGAAAGAAAGAGAGTTGAAGATAGGAGGAAGATTTTTCGCTTTAATGTCTTGGGAGAT 6516
|| ||| || | |||||||||| |||||||||||| || || ||||| ||| ||||
Sbjct 50363 AGCGAAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGAT 50304
Query 6517 TAGAGATTATTTTGTAATGACAGAATATTTAATTAAAACTCATTTTGTGCCTCTCTTTGA 6576
| |||| || ||||| ||||| ||||| | || || |||||||| || | || |
Sbjct 50303 TCGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAA 50244
Query 6577 CGGATTAACAATGGCTGATGATCTAACAACTGTTATCGGAAAGATT-TTGCGAAACACTG 6635
|| | || |||||||||||||||| || || || ||| || ||| || | | |
Sbjct 50243 GGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAG-CTCGG 50185
Query 6636 AAGGACAAGGAGAAGATGGATATGAAAGTGTCACCTTCGCAGATCATATAGATTACGAAA 6695
|||||||||| | || ||||||| ||||||| | || ||||| |||| ||||| |
Sbjct 50184 CTGGACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGA 50125
Query 6696 AATGGAACAATCATCAGAGAGGAGAGGCAAATAATCCAACTTTCAAAGTTATGGGACAAT 6755
||||||| ||||||||||| |||| ||| | ||| |||| |||||||| ||||
Sbjct 50124 AATGGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAAT 50065
Query 6756 TTTTAGGATACCCCAATTTAATTCAGAGAACTCATGAAATATTTGAGAAATCATGGATAT 6815
| | || || || | ||||| | || ||||| |||||||| || |||||||| |
Sbjct 50064 TCCTTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGAAAAGTCATGGATCT 50005
Query 6816 ATTATAATCGAAGGGGAGACTTATTG 6841
|||| || ||||| || ||| ||
Sbjct 50004 ATTACAACAATAGGGGTGATTTAATG 49979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36814630720920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |