Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_031268.1
Length=8683
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 161 5e-36
>seq2708
Length=213413
Score = 161 bits (178), Expect = 5e-36
Identities = 247/347 (71%), Gaps = 4/347 (1%)
Strand=Plus/Minus
Query 3684 AAGGAGCGAGAGTTAAAAGACG-TGGGAAGATTTTTCTCTCTGATGACCTGGGATCTGAG 3742
|||||||| ||||| || ||| | ||||||||||| | ||||| ||||| | | |
Sbjct 50359 AAGGAGCGGGAGTTGAA-GACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCG 50301
Query 3743 AGAGTATTTTGTATCCACTGAGTACCTCATTAAGATGTATTATGTTCCCTTGTTTGAAGG 3802
|||||| ||||| ||||| ||||| || ||| || ||| |||||| ||||| | ||
Sbjct 50300 AGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGG 50241
Query 3803 ACTCACCATGGCAGATGATCTAAAATCTGTAACACGAAAGATACTGGAGTGTACCACTGG 3862
|| || |||| |||||||||| | || | ||| || | ||| | | ||||
Sbjct 50240 TCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGG 50181
Query 3863 TCACGGTCAGATCGG-TTACAAGGTAGTCAGCTTTGCTAATCACTTAGACTATGAGAAAT 3921
|| || |||| | ||| | |||| | |||| ||||| ||||||| |||||||
Sbjct 50180 ACAAGGAG-GATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAAT 50122
Query 3922 GGAACAATCATCAGAGGAAAAAGTCAACCTTCCCCGTCTTCAAGGTTATGGGTCAGTTCC 3981
|||| ||||||||||||||| ||||||| ||| || |||| ||||||||| || ||||
Sbjct 50121 GGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCC 50062
Query 3982 TTGGGATGCCAAACCTATTCGCTCAAACTCATGATTTCTTCGAACAG 4028
|||| || || || || ||| || ||||| | || ||| ||
Sbjct 50061 TTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGAAAAG 50015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 27669370868648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |