Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_031278.1
Length=12247
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 120 2e-23
>seq2708
Length=213413
Score = 120 bits (132), Expect = 2e-23
Identities = 216/316 (68%), Gaps = 0/316 (0%)
Strand=Plus/Minus
Query 7348 GATTCTTTTCTCTGATGTCCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGA 7407
|||| ||| | ||||||||||| | | ||||| || ||||| || || || || ||||
Sbjct 50331 GATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAATACCTGA 50272
Query 7408 TTAAAACCCATTTTGTTCCCCTCTTTTATGGACTGACAATGGCTGATGATATGACAACAG 7467
| || ||||||||||| | || | || ||||| ||||||||||| | || ||||
Sbjct 50271 TCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAACCACAG 50212
Query 7468 TAGTACGCAAGATGATGGAAAACACCAGTGGACAGGGTTCTGATGATTATGAGCACATAG 7527
| | || ||||| || | | | |||||| || ||||||||| |
Sbjct 50211 TGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGAAACTGTCA 50152
Query 7528 GAATTGCCAATCACTTGGATTATGAAAAGTGGAATAATCACCAAAGATACCAATCTACAG 7587
||||| ||||| | || || || || ||||||||||| || || | | || ||||
Sbjct 50151 CCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAGTCAACAG 50092
Query 7588 AACCTGTATTCACAGTCATGGGCAAATTCCTCGGATATCCGAATTTAATTGCGAGAACTC 7647
| || ||||||| || ||||| ||||||| || ||||| | ||||| | | || |
Sbjct 50091 ACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCACTCGGACAC 50032
Query 7648 ATGAGTTCTTCGAGAA 7663
||||| | || || ||
Sbjct 50031 ATGAGATATTTGAAAA 50016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 39073746695624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |