Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_031278.1 Length=12247 Score E Sequences producing significant alignments: (Bits) Value seq2708 120 2e-23 >seq2708 Length=213413 Score = 120 bits (132), Expect = 2e-23 Identities = 216/316 (68%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 7348 GATTCTTTTCTCTGATGTCCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGA 7407 |||| ||| | ||||||||||| | | ||||| || ||||| || || || || |||| Sbjct 50331 GATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAATACCTGA 50272 Query 7408 TTAAAACCCATTTTGTTCCCCTCTTTTATGGACTGACAATGGCTGATGATATGACAACAG 7467 | || ||||||||||| | || | || ||||| ||||||||||| | || |||| Sbjct 50271 TCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAACCACAG 50212 Query 7468 TAGTACGCAAGATGATGGAAAACACCAGTGGACAGGGTTCTGATGATTATGAGCACATAG 7527 | | || ||||| || | | | |||||| || ||||||||| | Sbjct 50211 TGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGAAACTGTCA 50152 Query 7528 GAATTGCCAATCACTTGGATTATGAAAAGTGGAATAATCACCAAAGATACCAATCTACAG 7587 ||||| ||||| | || || || || ||||||||||| || || | | || |||| Sbjct 50151 CCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAGTCAACAG 50092 Query 7588 AACCTGTATTCACAGTCATGGGCAAATTCCTCGGATATCCGAATTTAATTGCGAGAACTC 7647 | || ||||||| || ||||| ||||||| || ||||| | ||||| | | || | Sbjct 50091 ACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCACTCGGACAC 50032 Query 7648 ATGAGTTCTTCGAGAA 7663 ||||| | || || || Sbjct 50031 ATGAGATATTTGAAAA 50016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39073746695624