Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_031301.1 Length=11103 Score E Sequences producing significant alignments: (Bits) Value seq2708 129 4e-26 >seq2708 Length=213413 Score = 129 bits (142), Expect = 4e-26 Identities = 223/322 (69%), Gaps = 4/322 (1%) Strand=Plus/Minus Query 6293 AAGGAACGTGAAGTTAAGAAAAAAGGTCGTTTCTTTTCTCTAATGTCATGGATGTTGCGA 6352 ||||| || || | |||| | ||| | || ||| | | ||||| ||| | | ||| Sbjct 50359 AAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGA 50300 Query 6353 GAATATTTTGTGATAACAGAATATTTAATCAAGGAGAATTACGTTCCTCTGTTTAGTGGA 6412 || || |||||||| || ||||| | |||||| | ||| ||||| |||| | || Sbjct 50299 GAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGT 50240 Query 6413 TTGACAATGGCTGATGATTTGACAACTGTCATATCAAAATTGTTAGATAGGAGTCAG--G 6470 |||| ||||||||||| | || || || || |||||| || | || || || | | Sbjct 50239 CTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGC--TCGGCTG 50182 Query 6471 GACAAGGTGGTAAAGATTACACTAATATTTGTATCGCAAATCATATTGACTATGAGAAAT 6530 ||||||| || ||||| | | | || || |||||| | ||||| ||||||| Sbjct 50181 GACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAAT 50122 Query 6531 GGAACAACCATCAAAGAAAAGCTGCAACTGATCCAGTTTTCAAGGTCATGGGAGAGTTCT 6590 |||| || ||||| || |||| |||| || ||||| |||| ||| ||||| | ||| Sbjct 50121 GGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCC 50062 Query 6591 TAGGATATCCCAACTTATTCAC 6612 | || ||||| ||||| |||| Sbjct 50061 TTGGCTATCCTCACTTAATCAC 50040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35413082849928