Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_031302.1
Length=11370
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 158 9e-35
>seq2708
Length=213413
Score = 158 bits (174), Expect = 9e-35
Identities = 263/380 (69%), Gaps = 0/380 (0%)
Strand=Plus/Minus
Query 6441 AAGGAGCGCGAACTGAAAATTGGAGGCAGATTCTTTGCCTTGATGTCCTGGGAAATAAGG 6500
|||||||| || |||| | | ||| ||||| ||||| |||||||||||| | || |
Sbjct 50359 AAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGA 50300
Query 6501 GATTATTTTGTAATGACTGAGTACTTGATTAAAACACACTTTGTTCCTCTATTTGATGGA 6560
|| || ||||| |||||||| ||| |||| || || |||||||| | || | ||
Sbjct 50299 GAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGT 50240
Query 6561 CTCACAATGGCAGATGACTTAACAACGGTAATCGGGAAAATTCTTCGAAACACGGAAGGA 6620
|| || |||| ||||| |||| || || || ||||| || | | ||| |||
Sbjct 50239 CTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGA 50180
Query 6621 CAAGGAGATACATCCTATGAAAATGTGACTTTTGCTGATCATATTGATTATGAAAAATGG 6680
||||||| | ||||||| ||| || |||| ||||| | || || || ||||||
Sbjct 50179 CAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGG 50120
Query 6681 AATAATCACCAAAGAGCAGAGGGAAACAACCCTACCTTCAGGGTTATGGGTCAATTTTTA 6740
|||||||| || || |||| || |||| |||||||||||||| ||||| |
Sbjct 50119 AATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTT 50060
Query 6741 GGGTACCCAAATTTGATTGAAAGAACACATGAAATCTTTGAAAAATCTTGGATATACTAT 6800
|| || || | || || | |||||||| || |||||||| || ||||| || ||
Sbjct 50059 GGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGAAAAGTCATGGATCTATTAC 50000
Query 6801 AATCGAAGAGGAGATTTGAT 6820
|| || || ||||| ||
Sbjct 49999 AACAATAGGGGTGATTTAAT 49980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36267451072656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |