Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_031302.1 Length=11370 Score E Sequences producing significant alignments: (Bits) Value seq2708 158 9e-35 >seq2708 Length=213413 Score = 158 bits (174), Expect = 9e-35 Identities = 263/380 (69%), Gaps = 0/380 (0%) Strand=Plus/Minus Query 6441 AAGGAGCGCGAACTGAAAATTGGAGGCAGATTCTTTGCCTTGATGTCCTGGGAAATAAGG 6500 |||||||| || |||| | | ||| ||||| ||||| |||||||||||| | || | Sbjct 50359 AAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGA 50300 Query 6501 GATTATTTTGTAATGACTGAGTACTTGATTAAAACACACTTTGTTCCTCTATTTGATGGA 6560 || || ||||| |||||||| ||| |||| || || |||||||| | || | || Sbjct 50299 GAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGT 50240 Query 6561 CTCACAATGGCAGATGACTTAACAACGGTAATCGGGAAAATTCTTCGAAACACGGAAGGA 6620 || || |||| ||||| |||| || || || ||||| || | | ||| ||| Sbjct 50239 CTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGA 50180 Query 6621 CAAGGAGATACATCCTATGAAAATGTGACTTTTGCTGATCATATTGATTATGAAAAATGG 6680 ||||||| | ||||||| ||| || |||| ||||| | || || || |||||| Sbjct 50179 CAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGG 50120 Query 6681 AATAATCACCAAAGAGCAGAGGGAAACAACCCTACCTTCAGGGTTATGGGTCAATTTTTA 6740 |||||||| || || |||| || |||| |||||||||||||| ||||| | Sbjct 50119 AATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTT 50060 Query 6741 GGGTACCCAAATTTGATTGAAAGAACACATGAAATCTTTGAAAAATCTTGGATATACTAT 6800 || || || | || || | |||||||| || |||||||| || ||||| || || Sbjct 50059 GGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGAAAAGTCATGGATCTATTAC 50000 Query 6801 AATCGAAGAGGAGATTTGAT 6820 || || || ||||| || Sbjct 49999 AACAATAGGGGTGATTTAAT 49980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36267451072656