Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_031304.1 Length=10306 Score E Sequences producing significant alignments: (Bits) Value seq2708 95.1 8e-16 >seq2708 Length=213413 Score = 95.1 bits (104), Expect = 8e-16 Identities = 217/323 (67%), Gaps = 4/323 (1%) Strand=Plus/Minus Query 5342 ATAGGAAGGTTCTTTTCTTTAATGACATGGGCTCTAAGGGAATATTTCGTCTCTACTGAG 5401 |||||||| || ||| | || ||| | ||| | | || || || || ||||| Sbjct 50338 ATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAA 50279 Query 5402 TATTTGATCAAAACTTACTTCGTTCCATTATTTGAGGGACTCACTATGGCTGATGATCTG 5461 || ||||||| | || |||||||| || |||| || ||| ||||||||||||| Sbjct 50278 TACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTA 50219 Query 5462 AAAGGAGTGACTCGCAAGATTCTCGACTGCTCCGCTGGCCAGGG-GAATAAAAACAGCTG 5520 | ||||| || || | || |||| ||||| || || | || | | || Sbjct 50218 ACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTA--TG 50161 Query 5521 CGA-TGTAGGGTTCGCCAATCATCTAGACTACGAGAAATGGAACAACCATCAACGGAAGG 5579 | ||| | || |||||| ||||||||||||||||||| || ||||| |||| | Sbjct 50160 AAACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAG 50101 Query 5580 AATCAACTTCTCCTGTTTTTACCGTCATGGGGCAATTCCTAGGGCTTCCCAAATTAATAG 5639 | ||||| || || || | || |||||||||||||| || ||| | ||||| Sbjct 50100 AGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCA 50041 Query 5640 CTAGGACACACGAATTTTTTGAA 5662 || ||||||| || | |||||| Sbjct 50040 CTCGGACACATGAGATATTTGAA 50018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32862777705680