Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_031305.1 Length=10833 Score E Sequences producing significant alignments: (Bits) Value seq2708 183 2e-42 >seq2708 Length=213413 Score = 183 bits (202), Expect = 2e-42 Identities = 248/346 (72%), Gaps = 0/346 (0%) Strand=Plus/Minus Query 6010 AGGGAAGGAACGGGAGTTGAAGAAAAACGGGCGCTTCTTCTCATTGATGTCATGGATGTT 6069 || |||||| ||||||||||||| | || | || || |||||||||| ||| | | Sbjct 50363 AGCGAAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGAT 50304 Query 6070 GCGAGAATATTTCGTGGTCACTGAGTACCTTATCAAGCTTCACTATGTTCCCCTTTTCTC 6129 ||||| || || ||| | ||||| ||||| |||||| | || | |||||| | ||| Sbjct 50303 TCGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAA 50244 Query 6130 AGGCCTGACTATGGCGGATGATCTAACCACAGTCATCACCAAATTATTGGACCGGACCCA 6189 || |||||| |||| ||||||||||||||||| || | ||| | | || | | Sbjct 50243 GGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGC 50184 Query 6190 AGGACAGGGAGGTACATCGTATGAAAATATCTGCATCGCCAATCACATTGATTATGAGAA 6249 ||||| ||||| | ||||||| | || ||| || ||||| | || || ||||| Sbjct 50183 TGGACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAA 50124 Query 6250 ATGGAACAATCATCAACGTCAGGAGGCCACTGCGCCAGTGTTCAGGGTGATGGGACAATT 6309 |||||| |||||||| | | ||| | || | ||||| |||||||| ||||| ||||| Sbjct 50123 ATGGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATT 50064 Query 6310 CCTTGGATATCCAAACCTCATTGCGAGGACCCATGAGTTCTTTCAA 6355 |||||| ||||| || | || | |||| |||||| | ||| || Sbjct 50063 CCTTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGAA 50018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34549114984248