Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_031690.1
Length=11308
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 134 1e-27
>seq2708
Length=213413
Score = 134 bits (148), Expect = 1e-27
Identities = 249/362 (69%), Gaps = 4/362 (1%)
Strand=Plus/Plus
Query 4492 GTAATATATCAGTGATTTTTCAAAGAATTCATGAGTTCGAGATATTAGTTTTGGATACCC 4551
|||||| ||| ||| |||||||| | ||||| || |||| |||| | ||||| ||
Sbjct 50000 GTAATAGATCCATGACTTTTCAAATATCTCATGTGTCCGAGTGATTAAGTGAGGATAGCC 50059
Query 4552 AAGAAACTTTCCCATCACATCAAATACAGGAT-TATTGGCT-TTGGCTCGTTGATGGTTA 4609
||| || | ||||| || ||||| || | | ||| || || ||| ||||| |||
Sbjct 50060 AAGGAATTGCCCCATAACCCTGAATACTGGGTCTGTTGACTCTTTCCTC--TGATGATTA 50117
Query 4610 TTCCATTTGCTATAATCAAAGTGATTGGCGATACAGATGTTCTCGTACCCTTCACTTCCT 4669
|||||||| || || | ||||| || || || | || || | | ||||
Sbjct 50118 TTCCATTTCTCGTAGTCTACATGATTCGCAATGGTGACAGTTTCATAATCAGATCCTCCT 50177
Query 4670 TGACCTGAAGTTGTATCCATCATTTTCTTTATGACGGTAGTCATATCATCTGCCATAGTT 4729
|| || | | | || |||||||| || || || || | |||||| |||| |||
Sbjct 50178 TGTCCAGCCGAGCTCTCAATCATTTTTGACATCACTGTGGTTAGATCATCAGCCACAGTC 50237
Query 4730 AGTCCTTTAAACAATGGAACAAAGTGAGTCTTGATTAGGTGTTCTGTTATTACAAAATAC 4789
|| || || |||||||||||||| || |||||| |||| ||| || || ||||| |||
Sbjct 50238 AGACCCTTGAACAATGGAACAAAATGCAACTTGATCAGGTATTCAGTCATCACAAAGTAC 50297
Query 4790 TCTCGTAAAGCCCAGGTCAATAGAGCATAAAATCTTCCTCCAATCTTGATCTCTCGCTCT 4849
||||| | ||||| || | ||| ||||||||||| | |||| | ||| |||||
Sbjct 50298 TCTCGAATCTGCCAGGACATCAATGCAAAAAATCTTCCTATAGTCTTCAACTCCCGCTCC 50357
Query 4850 TT 4851
||
Sbjct 50358 TT 50359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36069058451648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |