Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_001846.1 Length=31357 Score E Sequences producing significant alignments: (Bits) Value seq20205 100 6e-17 >seq20205 Length=635 Score = 100 bits (110), Expect = 6e-17 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 17879 AACGCCGTATTTATTAGTCCTTATAATAGTCAGAACTATGTTGCTAAGAGAGTCTTGGGA 17938 || || || ||||| ||||||||| |||||| ||| ||| | | |||| ||| Sbjct 556 AAAGCTGTTTTTATCTCACCTTATAATTCACAGAACGCTGTAGCTTCAAAAATCTTAGGA 497 Query 17939 TTACAAACCCAGACAGTAGACTCAGCGCAGGGTTCTGAATATGATTTTGTTATTTATTCA 17998 || | || ||||| || || ||| | ||||||||||||||||| | ||| || | || Sbjct 496 TTGCCTACGCAGACTGTTGATTCATCACAGGGTTCTGAATATGACTATGTCATATTCACA 437 Query 17999 CAGACTGCGGAAACAGCGCATTCTGTCAATGTAAATAGATTCAATGTTGCTATTACACGT 18058 || ||| | |||||||| || ||| ||||| || | |||||||| ||||| ||| | Sbjct 436 CAAACTACTGAAACAGCACACTCTTGTAATGTCAACCGCTTCAATGTGGCTATCACAAGG 377 Query 18059 GCTAA 18063 || || Sbjct 376 GCAAA 372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100169073727514