Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_002306.3 Length=29355 Score E Sequences producing significant alignments: (Bits) Value seq20205 109 1e-19 >seq20205 Length=635 Score = 109 bits (120), Expect = 1e-19 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 16690 AAAGCTGTTTTCATCTCACCCTATAATAGCCAAAATTATGTTGCTCGGCGTCTTCTTGGT 16749 ||||||||||| |||||||| |||||| || || ||| ||| | | || Sbjct 556 AAAGCTGTTTTTATCTCACCTTATAATTCACAGAACGCTGTAGCTTCAAAAATCTTAGGA 497 Query 16750 TTGCAAACGCAGACTGTGGACTCCGCGCAGGGTAGTGAGTATGATTATGTTATCTACACA 16809 |||| ||||||||||| || || | |||||| ||| ||||| ||||| || | |||| Sbjct 496 TTGCCTACGCAGACTGTTGATTCATCACAGGGTTCTGAATATGACTATGTCATATTCACA 437 Query 16810 CAGACTTCCGATACACAGCATGCTACTAATGTTAACAGATTCAATGTTGCCATTACGAGA 16869 || ||| | || ||| || || |||||| ||| | |||||||| || || || || Sbjct 436 CAAACTACTGAAACAGCACACTCTTGTAATGTCAACCGCTTCAATGTGGCTATCACAAGG 377 Query 16870 GCAAAGGTTGGTATACTTTGTATCATGTGTGATAGAACTATGTATGAGAATCT 16922 ||||| |||| || | || || |||| ||||||| | | ||||| || || Sbjct 376 GCAAAAATTGGCATTTTGTGCATAATGTCTGATAGAGATCTTTATGACAAACT 324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 93765980218702