Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_002645.1 Length=27317 Score E Sequences producing significant alignments: (Bits) Value seq20205 123 4e-24 >seq20205 Length=635 Score = 123 bits (136), Expect = 4e-24 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 16801 AAGGCTGTGTTTATCTCACCTTACAATAGTCAAAATTATGTAGCTGCCAGGCTTTTAGGC 16860 || ||||| |||||||||||||| ||| || || ||||||| | | | ||||| Sbjct 556 AAAGCTGTTTTTATCTCACCTTATAATTCACAGAACGCTGTAGCTTCAAAAATCTTAGGA 497 Query 16861 TTACAAACTCAGACAGTGGATTCTGCTCAAGGTAGTGAATATGACTATGTTATATTCGCA 16920 || | || ||||| || ||||| | || ||| ||||||||||||||| |||||| || Sbjct 496 TTGCCTACGCAGACTGTTGATTCATCACAGGGTTCTGAATATGACTATGTCATATTCACA 437 Query 16921 CAGACATCAGATACTGCTCATGCCTGTAATGCCAATCGTTTTAACGTTGCCATTACTAGA 16980 || || | || || || || | ||||||| ||| || || || || || || || || Sbjct 436 CAAACTACTGAAACAGCACACTCTTGTAATGTCAACCGCTTCAATGTGGCTATCACAAGG 377 Query 16981 GCAAAGAAAGGTATTTTCTGTATTATGTCTGACAGA 17016 ||||| | || ||||| || || |||||||| ||| Sbjct 376 GCAAAAATTGGCATTTTGTGCATAATGTCTGATAGA 341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 87252130186320