Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_005831.2 Length=27553 Score E Sequences producing significant alignments: (Bits) Value seq20205 120 5e-23 >seq20205 Length=635 Score = 120 bits (132), Expect = 5e-23 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 16720 AAGGCTGTGTTTATTTCTCCTTATAATAGTCAGAATTATGTTGCTAGTAGATTTTTAGGA 16779 || ||||| ||||| || ||||||||| ||||| ||| ||| | | | |||||| Sbjct 556 AAAGCTGTTTTTATCTCACCTTATAATTCACAGAACGCTGTAGCTTCAAAAATCTTAGGA 497 Query 16780 CTTCAAATTCAAACTGTTGATTCTTCTCAAGGTAGTGAGTATGATTATGTAATCTATGCA 16839 | | | || ||||||||||| || || ||| ||| ||||| ||||| || | || Sbjct 496 TTGCCTACGCAGACTGTTGATTCATCACAGGGTTCTGAATATGACTATGTCATATTCACA 437 Query 16840 CAAACTTCTGACACTGCACATGCTTGCAATGTAAACCGTTTTAATGTTGCTATAACACGT 16899 |||||| |||| || ||||| |||| ||||| ||||| || ||||| ||||| ||| | Sbjct 436 CAAACTACTGAAACAGCACACTCTTGTAATGTCAACCGCTTCAATGTGGCTATCACAAGG 377 Query 16900 GCTAAGAAGGGTATATTTTGTGTAATGTGTGATA 16933 || || | || || || || |||||| ||||| Sbjct 376 GCAAAAATTGGCATTTTGTGCATAATGTCTGATA 343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 88006950667404