Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_009019.1 Length=30286 Score E Sequences producing significant alignments: (Bits) Value seq20205 105 1e-18 >seq20205 Length=635 Score = 105 bits (116), Expect = 1e-18 Identities = 140/193 (73%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 17840 AATTGGAGTAAA-GCAGTATTTATTTCACCTTATAACAGTCAAAATGCTGTAGCTAGATC 17898 |||| || |||| || || ||||| ||||||||||| || || ||||||||| | Sbjct 566 AATTCGATTAAAAGCTGTTTTTATCTCACCTTATAATTCACAGAACGCTGTAGCTTCAAA 507 Query 17899 CATGTTAGGACTAACTACGCAGACTGTTGATTCTTCACAGGGCTCTGAATACCCGTATGT 17958 || |||||| | ||||||||||||||||||| |||||||| |||||||| ||||| Sbjct 506 AATCTTAGGATTGCCTACGCAGACTGTTGATTCATCACAGGGTTCTGAATATGACTATGT 447 Query 17959 GATTTTCTGTCAAACAGCAGACACTGCACATGCTAATAACTTAAATAGGTTTAATGTGGC 18018 || ||| ||||| | || || ||||| || ||| | || | || |||||||| Sbjct 446 CATATTCACACAAACTACTGAAACAGCACACTCTTGTAATGTCAACCGCTTCAATGTGGC 387 Query 18019 AGTGACTAGAGCA 18031 | || || ||| Sbjct 386 TATCACAAGGGCA 374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 96743642584688