Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_009657.1 Length=28203 Score E Sequences producing significant alignments: (Bits) Value seq20205 96.9 6e-16 >seq20205 Length=635 Score = 96.9 bits (106), Expect = 6e-16 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 16931 AAAGCTGTTTTTATTTCTCCTTACAACAGCCAAAATTATGTTGCTGGCAGAGTTTTGGGT 16990 |||||||||||||| || ||||| || || || ||| ||| | | | || || Sbjct 556 AAAGCTGTTTTTATCTCACCTTATAATTCACAGAACGCTGTAGCTTCAAAAATCTTAGGA 497 Query 16991 CTTCAAATTCAAACTGTTGACTCTTCACAAGGTAGTGAGTATGATTATGTCATTTATACA 17050 | | | || |||||||| || ||||| ||| ||| ||||| |||||||| | ||| Sbjct 496 TTGCCTACGCAGACTGTTGATTCATCACAGGGTTCTGAATATGACTATGTCATATTCACA 437 Query 17051 CAAACTTCTGATACTGCTCATGCTAGTAACGTTAATAGGTTTAACGTTGCTATAACTAGA 17110 |||||| |||| || || || || |||| || || | || || || ||||| || || Sbjct 436 CAAACTACTGAAACAGCACACTCTTGTAATGTCAACCGCTTCAATGTGGCTATCACAAGG 377 Query 17111 GCTAAGAAGGGTATCCTGTGTATTATGTGTGATCGTGAGTTGTTTGACATACT 17163 || || | || || |||| || |||| |||| | || | | ||||| ||| Sbjct 376 GCAAAAATTGGCATTTTGTGCATAATGTCTGATAGAGATCTTTATGACAAACT 324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 90085905382254