Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_009988.1 Length=27165 Score E Sequences producing significant alignments: (Bits) Value seq20205 98.7 2e-16 >seq20205 Length=635 Score = 98.7 bits (108), Expect = 2e-16 Identities = 164/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 16730 GCTGTGTTTATTTCACCATATAATAGTCAAAACTATGTTGCTGGGCGCATGTTGGGTTTA 16789 ||||| ||||| ||||| |||||| || ||| ||| ||| || || || || Sbjct 553 GCTGTTTTTATCTCACCTTATAATTCACAGAACGCTGTAGCTTCAAAAATCTTAGGATTG 494 Query 16790 CAGACACAAACTGTGGACTCTGCGCAAGGTAGCGAGTATGACTATGTTATTTATACACAG 16849 | || || ||||| || || | || ||| || ||||||||||| || | ||||| Sbjct 493 CCTACGCAGACTGTTGATTCATCACAGGGTTCTGAATATGACTATGTCATATTCACACAA 434 Query 16850 ACTTCTGATACATCTCATGCCCTTAATGTTAACAGGTTTAATGTTGCCATTACACGCACC 16909 ||| |||| ||| | || | |||||| ||| | || ||||| || || ||| | | Sbjct 433 ACTACTGAAACAGCACACTCTTGTAATGTCAACCGCTTCAATGTGGCTATCACAAGGGCA 374 Query 16910 AAGATTGGTATTTTGTGTATTATGTGTGACAAGGCACTGTATGACACATTGAAATTT 16966 || ||||| |||||||| || |||| ||| | | || ||||||| | || ||||| Sbjct 373 AAAATTGGCATTTTGTGCATAATGTCTGATAGAGATCTTTATGACAAACTGCAATTT 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 86765974622232