Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_012936.1 Length=31250 Score E Sequences producing significant alignments: (Bits) Value seq20205 95.1 2e-15 >seq20205 Length=635 Score = 95.1 bits (104), Expect = 2e-15 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 17834 AATGCCGTATTTATTAGTCCCTATAATAGTCAGAACTATGTTGCTAAGAGGGTCTTGGGA 17893 || || || ||||| || |||||| |||||| ||| ||| | |||| ||| Sbjct 556 AAAGCTGTTTTTATCTCACCTTATAATTCACAGAACGCTGTAGCTTCAAAAATCTTAGGA 497 Query 17894 TTACAAACCCAGACAGTGGATTCAGCGCAGGGTTCTGAATATGATTTTGTTATTTATTCG 17953 || | || ||||| || |||||| | ||||||||||||||||| | ||| || | | Sbjct 496 TTGCCTACGCAGACTGTTGATTCATCACAGGGTTCTGAATATGACTATGTCATATTCACA 437 Query 17954 CAGACTGCGGAAACAGCGCATTCTGTTAATGTAAATAGATTCAATGTTGCTATTACACGT 18013 || ||| | |||||||| || ||| |||||| || | |||||||| ||||| ||| | Sbjct 436 CAAACTACTGAAACAGCACACTCTTGTAATGTCAACCGCTTCAATGTGGCTATCACAAGG 377 Query 18014 GCTAA 18018 || || Sbjct 376 GCAAA 372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99826850448072