Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_017083.1 Length=31100 Score E Sequences producing significant alignments: (Bits) Value seq20205 109 1e-19 >seq20205 Length=635 Score = 109 bits (120), Expect = 1e-19 Identities = 170/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 17797 AACGCCGTTTTTATTAGCCCTTATAATAGTCAGAACTTTGCTGCTAAACGCGTTTTGGGT 17856 || || |||||||| ||||||||| |||||| || ||| | | || || Sbjct 556 AAAGCTGTTTTTATCTCACCTTATAATTCACAGAACGCTGTAGCTTCAAAAATCTTAGGA 497 Query 17857 CTTCAGACTCAAACCGTTGATTCAGCGCAAGGGTCTGAATATGATTATGTCATTTATTCA 17916 | | || || || ||||||||| | || || ||||||||||| |||||||| | || Sbjct 496 TTGCCTACGCAGACTGTTGATTCATCACAGGGTTCTGAATATGACTATGTCATATTCACA 437 Query 17917 CAGACTGCGGAAACAGCGCATTCTGTTAATGTTAATCGCTTCAATGTAGCTATTACCAGG 17976 || ||| | |||||||| || ||| |||||| || ||||||||||| ||||| || ||| Sbjct 436 CAAACTACTGAAACAGCACACTCTTGTAATGTCAACCGCTTCAATGTGGCTATCACAAGG 377 Query 17977 GCCAAGAAAGGTATTCTCTGTGTCATGTGTAATATGCAACTTTTTGAGGCTTTACAATTT 18036 || || | || ||| | || | |||| | ||| | |||| ||| | |||||| Sbjct 376 GCAAAAATTGGCATTTTGTGCATAATGTCTGATAGAGATCTTTATGACAAACTGCAATTT 317 Query 18037 ACA 18039 ||| Sbjct 316 ACA 314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99347098187172