Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_028752.1 Length=27395 Score E Sequences producing significant alignments: (Bits) Value seq20205 132 8e-27 >seq20205 Length=635 Score = 132 bits (146), Expect = 8e-27 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16816 AAAGCTGTATTTATTTCACCTTATAATAGTCAGAACTATGTAGCTGCTAGGCTTTTAGGT 16875 |||||||| ||||| |||||||||||| |||||| ||||||| | | | ||||| Sbjct 556 AAAGCTGTTTTTATCTCACCTTATAATTCACAGAACGCTGTAGCTTCAAAAATCTTAGGA 497 Query 16876 TTACAAACTCAGACGGTGGATTCTGCTCAAGGCAGTGAATATGATTATGTAATATTYGCA 16935 || | || ||||| || ||||| | || || ||||||||| ||||| ||||| || Sbjct 496 TTGCCTACGCAGACTGTTGATTCATCACAGGGTTCTGAATATGACTATGTCATATTCACA 437 Query 16936 CAGACATCAGATACTGCTCATGCTTGTAATGCCAATCGTTTTAACGTTGCCATTACTAGA 16995 || || | || || || || ||||||||| ||| || || || || || || || || Sbjct 436 CAAACTACTGAAACAGCACACTCTTGTAATGTCAACCGCTTCAATGTGGCTATCACAAGG 377 Query 16996 GCAAAGAAAGGCATCTTTTGTATTATGTCTGACAGAACTCTGTTTGA 17042 ||||| | ||||| || || || |||||||| ||| ||| | ||| Sbjct 376 GCAAAAATTGGCATTTTGTGCATAATGTCTGATAGAGATCTTTATGA 330 Lambda K H 0.636 0.409 0.916 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 87501604752102