Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_028806.1 Length=28111 Score E Sequences producing significant alignments: (Bits) Value seq20205 100 5e-17 >seq20205 Length=635 Score = 100 bits (110), Expect = 5e-17 Identities = 154/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 16605 AAAGCTGTTTTCATCTCACCCTATAATAGTCAAAATTATGTTGCTCGGCGTCTTCTTGGT 16664 ||||||||||| |||||||| |||||| || || ||| ||| | | || Sbjct 556 AAAGCTGTTTTTATCTCACCTTATAATTCACAGAACGCTGTAGCTTCAAAAATCTTAGGA 497 Query 16665 TTGCAAACGCAAACCGTGGATTCCGCCCAGGGTAGTGAGTATGATTACGTCATCTACACA 16724 |||| ||||| || || ||||| | |||||| ||| ||||| || ||||| | |||| Sbjct 496 TTGCCTACGCAGACTGTTGATTCATCACAGGGTTCTGAATATGACTATGTCATATTCACA 437 Query 16725 CAAACCTCTGATACACAGCATGCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGA 16784 ||||| |||| ||| || || |||||| ||| | || ||||| || || || || Sbjct 436 CAAACTACTGAAACAGCACACTCTTGTAATGTCAACCGCTTCAATGTGGCTATCACAAGG 377 Query 16785 GCAAAGGTTGGTATACTTTGTG--TCATGTGTGATAGA 16820 ||||| |||| || |||||| | |||| ||||||| Sbjct 376 GCAAAAATTGGCAT--TTTGTGCATAATGTCTGATAGA 341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 89791653330306