Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_028811.1 Length=27935 Score E Sequences producing significant alignments: (Bits) Value seq20205 98.7 2e-16 >seq20205 Length=635 Score = 98.7 bits (108), Expect = 2e-16 Identities = 165/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 16519 AATGCAGTTTTTATTTCACCTTATAATAGTCAGAATTATGTAGCAGCCAGAGTGTTAGGT 16578 || || |||||||| |||||||||||| ||||| |||||| | | | | ||||| Sbjct 556 AAAGCTGTTTTTATCTCACCTTATAATTCACAGAACGCTGTAGCTTCAAAAATCTTAGGA 497 Query 16579 TTGCAGATACAAACCGTGGACTCGTCTCAAGGCAGCGAATATGACTATGTTATTTACACA 16638 |||| | || || || || || || || || |||||||||||||| || | |||| Sbjct 496 TTGCCTACGCAGACTGTTGATTCATCACAGGGTTCTGAATATGACTATGTCATATTCACA 437 Query 16639 CAGACATCAGACACACTGCATGCATGCAATGTTAATAGATTTAACGTTGCTATAACGCGT 16698 || || | || ||| || | || ||||| || | || || || ||||| || | Sbjct 436 CAAACTACTGAAACAGCACACTCTTGTAATGTCAACCGCTTCAATGTGGCTATCACAAGG 377 Query 16699 GCTAAGAAAGGTATTTTCTGTGTCATGTGTGATAGAACTCTGTATGACTCACTCAAATT 16757 || || | || ||||| || | |||| ||||||| ||| |||||| ||| |||| Sbjct 376 GCAAAAATTGGCATTTTGTGCATAATGTCTGATAGAGATCTTTATGACAAACTGCAATT 318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 89228736361362