Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_025391.1 Length=11156 Score E Sequences producing significant alignments: (Bits) Value seq110009 82.4 5e-12 >seq110009 Length=642 Score = 82.4 bits (90), Expect = 5e-12 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 6389 AAAGAACGAGAACTCAAGATTAAAGGAAGATTCTTTGCTCTGATGAGCTGGGCACTTCGA 6448 ||||| || || | || | | |||||||||||| || || ||| |||||| | ||| Sbjct 395 AAAGAGCGCGAGATGAAAAGGATAGGAAGATTCTTCGCCCTAATGTCCTGGGCCTTGCGA 454 Query 6449 GAATATTTTGTAATCACCGAGTGGCTTATCAAACAACACTTCCTACCTTTATTTGAGGGA 6508 ||||||||||| | ||||| | | || ||| | || | ||||||||||| ||| Sbjct 455 GAATATTTTGTTTTGACCGAATTATTGATAAAAAACTTTTTTGTTCCTTTATTTGATGGA 514 Query 6509 CTCACTATGGCAGATGATCT 6528 || || ||||| |||||||| Sbjct 515 CTAACAATGGCCGATGATCT 534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35468461242880