Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_025393.1 Length=11482 Score E Sequences producing significant alignments: (Bits) Value seq42553 86.0 5e-13 >seq42553 Length=2057 Score = 86.0 bits (94), Expect = 5e-13 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 6649 TGAAGGCAAAGGAGAGAGAACTTAAAAGGTTTGGAAGATTTTTTACTCTTATGACATGGG 6708 ||| || ||||||||||| | |||||| |||||||||||||| |||| ||| | |||| Sbjct 610 TGAGGGGGAAGGAGAGAGAGATGAAAAGGGTTGGAAGATTTTTTGCTCTCATGTCCTGGG 551 Query 6709 ATCTTAGATTGTATTTTGTAATTTCGGAATATCTGATAAAAAAGGATTTAGTCAAAATGT 6768 ||||| || ||| ||||| | | || || || || ||| || | || ||| ||| Sbjct 550 ATCTTCGAGAGTACTTTGTCCTCACAGAGTACCTCATCAAAGAGCACTTCGTCCCCTTGT 491 Query 6769 TTGACGGTTTGACAATGGCTGA 6790 | | || || |||||||| || Sbjct 490 TCAAAGGATTAACAATGGCCGA 469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36508274045504