Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_008514.1
Length=11545
Score E
Sequences producing significant alignments: (Bits) Value
seq57646 105 5e-19
seq28589 104 2e-18
>seq57646
Length=1202957
Score = 105 bits (116), Expect = 5e-19
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 6682 TGGGTTAGACGAAGAAGATCTGGTTATCGGATTGAAAGGGAAAGAAAGAGAATTAAAGAA 6741
||| ||||| ||| || | ||||| || | | |||||||||||||||| |||| |
Sbjct 1171142 TGGATTAGAGTTAGAGCATTTAGTTATAGGTCTAAGAGGGAAAGAAAGAGAAATAAAAAG 1171083
Query 6742 AGCAGGACGTTTCTTCTCCCTTATGTCATGGAAATTACGAGAGTATTTCGTCATGACAGA 6801
| ||| | |||||||| || ||| ||||| || | | || || || || || |||||
Sbjct 1171082 ATTAGGTAGATTCTTCTCTCTGATGACATGGCAACTCAGGGATTACTTTGTAATAACAGA 1171023
Query 6802 ATATCTGATCAAACACCACTTTGTCCCACTATTTCATGGATTGACTATGGCGGATGACAT 6861
||||| || ||| |||| | | ||||||||| || || |||||||| ||||| |
Sbjct 1171022 GTATCTTATTAAAATTCACTATATTCCACTATTTTCAGGGTTAACTATGGCCGATGATTT 1170963
Query 6862 GACTCAAGTTATGAAGAAAAT 6882
| | ||||||||| || ||
Sbjct 1170962 AAATTCAGTTATGAAAAAGAT 1170942
>seq28589
Length=6593
Score = 104 bits (114), Expect = 2e-18
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 7403 AAATTGGGTTTAATTATCAACAATGATGAGACTATCCAGTCAGCAGATTTCCTGACATAT 7462
||||| ||| | || ||||||| ||||| ||||| | || ||||||||||||| |||
Sbjct 2158 AAATTAGGTCTTATAATCAACAGAGATGAAACTATGCGATCTGCAGATTTCCTGAGTTAT 2217
Query 7463 GGAAAAATACCAATCTTCCGCGGAAACATTCGTTGTCTAGAAGGGAAAAGGTGGTCCAGG 7522
|| ||| | || | || || ||||||||| | | |||| ||||| ||||| |
Sbjct 2218 GGGAAAGTCCCTGTATTTCGAGGAAACATTAGGGGATTAGAGACTAAAAGATGGTCACGA 2277
Query 7523 GTGACATGTGTGACCAATGATCAACTTCCAAATTTATCTAATGTTTTGTCATCAGTCTCA 7582
|| || || ||| ||||||||||||| || ||| ||| | ||||| | || ||
Sbjct 2278 GTCACTTGCGTGTCCAATGATCAACTGCCCGGATTAGGGAATATCTTGTCGACTGTATCT 2337
Query 7583 ACAAATGCTCTAACCGTCTCTCACT 7607
||||||| | || ||||| ||||
Sbjct 2338 TCAAATGCCTTGACAGTCTCACACT 2362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36803920258124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |