Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_020803.1 Length=11487 Score E Sequences producing significant alignments: (Bits) Value seq57646 109 4e-20 >seq57646 Length=1202957 Score = 109 bits (120), Expect = 4e-20 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 6643 ATAGGCTTAAAAGGGAAAGAACGTGAATTAAAAAAGGCAGGACGGTTCTTCTCTCTGATG 6702 ||||| ||| |||||||||| | ||| |||||| ||| | ||||||||||||||| Sbjct 1171117 ATAGGTCTAAGAGGGAAAGAAAGAGAAATAAAAAGATTAGGTAGATTCTTCTCTCTGATG 1171058 Query 6703 TCATGGGAATTGAGAGAATATTTTGTAATAACAGAATACTTAATCAAGACACACTATGTG 6762 ||||| || | || || || |||||||||||||| || | || || | |||||| | Sbjct 1171057 ACATGGCAACTCAGGGATTACTTTGTAATAACAGAGTATCTTATTAAAATTCACTATATT 1170998 Query 6763 CCCTTATTCAAAGGGTTAACCATGGCAGATGAT 6795 || |||| ||||||||| ||||| |||||| Sbjct 1170997 CCACTATTTTCAGGGTTAACTATGGCCGATGAT 1170965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36618445640436