Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_020804.1
Length=13298
Score E
Sequences producing significant alignments: (Bits) Value
seq57646 98.7 8e-17
>seq57646
Length=1202957
Score = 98.7 bits (108), Expect = 8e-17
Identities = 373/571 (65%), Gaps = 22/571 (4%)
Strand=Plus/Minus
Query 7979 TAGCCAGTGATCTTGCATTTAAAGTTTTA-AAGAAAAAGTTTAGAGAAGATAAAAAATGG 8037
|||| ||||| | ||||| | || ||| |||| || || | |||| | |||||||||
Sbjct 1171521 TAGCTAGTGACATGGCATTCATTGTGTTACAAGATCAATTTAAAAGAA-AGAAAAAATGG 1171463
Query 8038 TATGTTGATCACaaaaaaaTGGATC--AGA-ATAATTTACTCTACACTCATATTAAAAAT 8094
| ||| || | | || || ||| || || ||||||| || ||||| |||
Sbjct 1171462 TTTGTCAATATCGCAGGTAT---TCCAAGAGATCATGTACTCTATGACCACATTAAGAAT 1171406
Query 8095 AACACATGGCCTAATC---CTCAAACTAGAATTCAATTTGGAGATAACTGGCACAAACTG 8151
|| |||||||| | || |||||| ||| || | ||||| || ||||| ||||
Sbjct 1171405 AATACATGGCCAACTCATTCTCAAA-TAG--TTGATTTTGGTGACCGATGGCATGAACTA 1171349
Query 8152 CCATTGATTAAATGTTTCGAATTGCCAGACATGATTGATTTATCATCAATTTATTCAGAC 8211
|| || |||||| || || | || || | || ||| | ||||||||||||
Sbjct 1171348 CCGTTATCTAAATGCTTTGAGATACCCGATGTAATAGATCCTAGTTTAATTTATTCAGAT 1171289
Query 8212 AA--GTCACATAGCTTA-ACAAGATCACAAGTAGTAGAACATGTAAGATATAATTCAGAT 8268
|| ||||| |||| || ||| || || || ||| | | | | | ||
Sbjct 1171288 AAAAGTCACT---CTTATACTTTTTCAGAATTAAAGGAGCATATCTTAAAGTCTCCCAAT 1171232
Query 8269 AAGCCTATCCCGACTAAAAGGGTTCTTAACACTCTCTTGGAAACAGAAAATGTCAATTGG 8328
| ||| |||| || | | ||| || || || || | |||||||| ||||||
Sbjct 1171231 ACACCTGTCCCATCTCATAAGGTACTCAAGACATTCCTTCAAACAGAAGCCACAAATTGG 1171172
Query 8329 CCTGAATTTCTTAAATCAGTCAATGATTTTGGCCTACCTCCAGAAGATCTTGTTATAGGA 8388
||||| || || | ||||||||||| || ||| || | ||||||||
Sbjct 1171171 AAGGAATTCCTCAAGAAGATAAATGATTTTGGATTAGAGTTAGAGCATTTAGTTATAGGT 1171112
Query 8389 TTAAAACCCAAAGAGAGAGAAATGAAAAGAACTGGTCGttttttttCATTGATGACATGG 8448
||| | ||||| |||||||| |||||| ||| | || || || |||||||||||
Sbjct 1171111 CTAAGAGGGAAAGAAAGAGAAATAAAAAGATTAGGTAGATTCTTCTCTCTGATGACATGG 1171052
Query 8449 -AACTTACGGAATTATTTTGTCATGACTGAGTTATTAATTAAAGAACACTTCATAGGACT 8507
|||| | || |||| ||||| || || |||| | |||||| |||| || |||
Sbjct 1171051 CAACTCA-GGGATTACTTTGTAATAACAGAGTATCTTATTAAAATTCACTATATTCCACT 1170993
Query 8508 ATTCAACGGTTTAACCATGGCTGATGACTTA 8538
||| || ||||| ||||| ||||| |||
Sbjct 1170992 ATTTTCAGGGTTAACTATGGCCGATGATTTA 1170962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 42405736537807
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |