Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_022580.1
Length=12676
Score E
Sequences producing significant alignments: (Bits) Value
seq57646 100 2e-17
seq40018 95.1 1e-15
>seq57646
Length=1202957
Score = 100 bits (110), Expect = 2e-17
Identities = 134/184 (73%), Gaps = 2/184 (1%)
Strand=Plus/Minus
Query 7709 TTTGGTTATTGGTTTACAAGCCAAAGAAAGGGAAATCAAG-GATGAGGGTCGATTTTTCT 7767
||| ||||| ||| || || |||||||| ||||| || ||| ||| | |||| ||||
Sbjct 1171124 TTTAGTTATAGGTCTAAGAGGGAAAGAAAGAGAAATAAAAAGATTAGG-TAGATTCTTCT 1171066
Query 7768 CTTTAATGTCATGGGAATTACGGGAATATTTTGTTGTAACAGAATACTTAATTAAAGAGC 7827
|| | ||| ||||| || | |||| || ||||| ||||||| || | |||||| |
Sbjct 1171065 CTCTGATGACATGGCAACTCAGGGATTACTTTGTAATAACAGAGTATCTTATTAAAATTC 1171006
Query 7828 ATTTTGTTCCATTGTTCCATGGATTAACGATGGCAGATGATTTAACCACTGTGATGAAAA 7887
| | | ||||| | || || ||||| ||||| |||||||||| | || |||||||
Sbjct 1171005 ACTATATTCCACTATTTTCAGGGTTAACTATGGCCGATGATTTAAATTCAGTTATGAAAA 1170946
Query 7888 AGAT 7891
||||
Sbjct 1170945 AGAT 1170942
>seq40018
Length=56561
Score = 95.1 bits (104), Expect = 1e-15
Identities = 276/428 (64%), Gaps = 9/428 (2%)
Strand=Plus/Plus
Query 7785 TTACGGGAATATTTTGTTGTAACAGAATACTTAATTAAAGAGCATTTTGTTCCATTGTTC 7844
||| | ||||||||||| | || || ||| | |||||| || | ||| | ||||
Sbjct 43548 TTAAGAGAATATTTTGTAATCACCGAGTACCTGATTAAAACACACTATGTATCCCTGTTA 43607
Query 7845 CATGGATTAACGATGGCAGATGATTTAACCACTGTGATGAAAAAGATGCTGGACAATACA 7904
| || | || |||||||||||| ||||||| ||| | ||||||| || || | |||
Sbjct 43608 AAAGGTCTCACTATGGCAGATGATCTAACCACACTGACAACAAAGATGATGAACTACACA 43667
Query 7905 ATCGGCCAAGGTGGCAAGGACTACACACAAATTTGCA----TAGCCAATCACTTTGATTA 7960
| || || | | || | || || | | | |||| |||| | || ||
Sbjct 43668 ACGGGACAGGATCTAAATAATTATGATCATGTCAGTAGATATAGCAAATCTAATAGACTA 43727
Query 7961 TGAGAAATGGAACAATCATCAGAGGAAGGAATCTANNNNNNNNNNNNNNNNNNNNATGGG 8020
||||||||||||||| |||| |||| |||| | ||| |
Sbjct 43728 GGAGAAATGGAACAATAATCAAAGGAGACAATCCAACAGTCTGATCTTCCGTGTAATGAG 43787
Query 8021 GCAGTTTCTCGGATATCCCTCCTTAATTGAGAGAACTCATGAATTCTTTGAAAAAAGCTG 8080
||| | || | ||| ||||||||||| || || ||||||||||| || || |
Sbjct 43788 TGCGTTCTTGGGGTGTCCGAATTTAATTGAGAGGACACACGAATTCTTTGAGAAGAGTTT 43847
Query 8081 GATTTATTATAAGGACAGAGCAGAT-TGTTTAGAAGTGAAGGGTGATAGAATTT---ACT 8136
|||||| ||| || | | | ||| || | || |||| ||||| | | |||
Sbjct 43848 GATTTACTATGCCGATAAACCTGATCTGATGAGGGTAGAAGA-TGATATGCTATTCAACT 43906
Query 8137 CCACTGAAGGGCAATTCTGTTGGAATGGACAACTAGGAGGATTGGAAGGTCTCCGACAAA 8196
| ||||| || | || ||||||||||||| ||| || |||||||| || || |||
Sbjct 43907 CAACTGATAGGTTGGTGTGCTGGAATGGACAACGAGGGGGTTTGGAAGGGCTAAGATAAA 43966
Query 8197 AAGGTTGG 8204
||||||||
Sbjct 43967 AAGGTTGG 43974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40420675303040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |