Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_025358.1
Length=15024
Score E
Sequences producing significant alignments: (Bits) Value
seq57646 116 4e-22
>seq57646
Length=1202957
Score = 116 bits (128), Expect = 4e-22
Identities = 295/446 (66%), Gaps = 12/446 (3%)
Strand=Plus/Minus
Query 9888 ATAGATGAATTTGGGGATCACTGGCATGAATTACCACTGACACAATGTTATGAGATACCA 9947
|||| ||| ||||| || | ||||||||| |||| | | |||| | |||||||||
Sbjct 1171381 ATAGTTGATTTTGGTGACCGATGGCATGAACTACCGTTATCTAAATGCTTTGAGATACCC 1171322
Query 9948 GATATGATAGACATCAGTCAGATTTATTCAGATAAGAGTCACTCATTGGATAGGTCTGAG 10007
||| | ||||| ||| |||||||||||||| |||||||| | ||| | |
Sbjct 1171321 GATGTAATAGATCCTAGTTTAATTTATTCAGATAAAAGTCACTCTT---ATACTTTTTCA 1171265
Query 10008 GTTTTAAAGAT---TATC---AAGGAACAAAAACATAAAAGGATCCCTACTAAAAGGGTA 10061
| |||||| |||| ||| | || || | |||| || | | ||||
Sbjct 1171264 GAATTAAAGGAGCATATCTTAAAGTCTCCCAA---TACACCTGTCCCATCTCATAAGGTA 1171208
Query 10062 CTACAGACATTACTTGAAAAGCCAGCTACGAATTGGCCTGAATTTCTTAAAGCAATTAAT 10121
|| ||||||| ||| ||| ||| || |||||| ||||| || || || |||
Sbjct 1171207 CTCAAGACATTCCTTCAAACAGAAGCCACAAATTGGAAGGAATTCCTCAAGAAGATAAAT 1171148
Query 10122 GATCACGGACTAGATTGGGAAAAATTGGTGATTGGGTTGAAAGCTAAGGAACGAGAACTT 10181
||| ||| |||| | || | || || || || | | || || ||| ||||| |
Sbjct 1171147 GATTTTGGATTAGAGTTAGAGCATTTAGTTATAGGTCTAAGAGGGAAAGAAAGAGAAATA 1171088
Query 10182 AAAGAAGAAGGTAGATTCTTTTCTTTAATGTCTTACGAATTGAGGGATTATTTTGTATCT 10241
||| | |||||||||||| ||| | ||| | | || | |||||||| ||||||
Sbjct 1171087 AAAAGATTAGGTAGATTCTTCTCTCTGATGACATGGCAACTCAGGGATTACTTTGTAATA 1171028
Query 10242 ACTGAATACCTGATCAAGAAATATTTTGTACCCTTATTTGAAGGTCTAACAATGGCTGAT 10301
|| || || || || || | | | | | || ||||| ||| |||| ||||| |||
Sbjct 1171027 ACAGAGTATCTTATTAAAATTCACTATATTCCACTATTTTCAGGGTTAACTATGGCCGAT 1170968
Query 10302 GATTTGAATACAGTAATTAAGAAGAT 10327
||||| ||| |||| || || |||||
Sbjct 1170967 GATTTAAATTCAGTTATGAAAAAGAT 1170942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 47925101688569
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |