Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_025362.1 Length=12240 Score E Sequences producing significant alignments: (Bits) Value seq57646 89.7 4e-14 >seq57646 Length=1202957 Score = 89.7 bits (98), Expect = 4e-14 Identities = 117/161 (73%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 7431 GCATTGA-TTATTGGTTTGAAAGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAttttt 7489 ||||| | |||| ||| | | || |||||||||||||| ||| || |||| ||||| || Sbjct 1171127 GCATTTAGTTATAGGTCTAAGAGGGAAAGAAAGAGAAATAAAAAGATTAGGTAGATTCTT 1171068 Query 7490 ttCACTTATGTCTTGGGAACTGAGGGAGTATTTTGTATCTACTGAATACTTGATTAAGAA 7549 || || ||| | ||| |||| ||||| || |||||| || || || | ||||| | Sbjct 1171067 CTCTCTGATGACATGGCAACTCAGGGATTACTTTGTAATAACAGAGTATCTTATTAAAAT 1171008 Query 7550 GCATTTTGTACCATTGTTTAAAGGCTTGACTATGGCTGATG 7590 || | | | ||| | ||| ||| || |||||||| |||| Sbjct 1171007 TCACTATATTCCACTATTTTCAGGGTTAACTATGGCCGATG 1170967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39026417832144