Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_025391.1 Length=11156 Score E Sequences producing significant alignments: (Bits) Value seq40018 100 2e-17 >seq40018 Length=56561 Score = 100 bits (110), Expect = 2e-17 Identities = 286/432 (66%), Gaps = 12/432 (3%) Strand=Plus/Plus Query 6447 GAGAATATTTTGTAATCACCGAGTGGCTTATCAAACAACACTTCCTACCTTTATTTGAGG 6506 |||||||||||||||||||||||| || || ||| ||||| || | | || | | Sbjct 43552 GAGAATATTTTGTAATCACCGAGTACCTGATTAAAACACACTATGTATCCCTGTTAAAAG 43611 Query 6507 GACTCACTATGGCAGATGATCTGAACACCGTGATTACTAAGATGATAAACAAAACAACAG 6566 | |||||||||||||||||||| | ||| ||| || |||||||| ||| | ||||| | Sbjct 43612 GTCTCACTATGGCAGATGATCTAACCACACTGACAACAAAGATGATGAACTACACAACGG 43671 Query 6567 GTCATGACC--ATTCATCTTGTACAGAGTTAATCACTATCTGCAACCATC---TGGACTA 6621 | || || | | | || || || || | | ||| |||| ||| | ||||| Sbjct 43672 GACAGGATCTAAATAATTATGATCA-TGTCAGTAGATAT-AGCAA--ATCTAATAGACTA 43727 Query 6622 TGAAAAGTGGAATAACAATCAACGTGGGAAATCTAATGATCCTGTATTTAAAGTAATGGG 6681 || || ||||| || |||||| | | |||| || || | || |||||| | Sbjct 43728 GGAGAAATGGAACAATAATCAAAGGAGACAATCCAACAGTCTGATCTTCCGTGTAATGAG 43787 Query 6682 GCAGTTTTTGGGTTACCCTAACTTGATTACTCGTACTCATGAAGTTTTTGAGAAATCATT 6741 ||| ||||| | || || || ||| | || || ||| | |||||||| || Sbjct 43788 TGCGTTCTTGGGGTGTCCGAATTTAATTGAGAGGACACACGAATTCTTTGAGAAGAGTTT 43847 Query 6742 CATATATTTTGTCAACAGACCCGACATGAT--GGTAAGCAACGGAACTGATATCGCGAGC 6799 || || | || | | | ||| || |||| || || | || || ||| | Sbjct 43848 GATTTACTATGCCGATAAACCTGATCTGATGAGGGTAGAAGATGATATGCTATTCAACTC 43907 Query 6800 AA-AGACAAATTAGTGTGTTGGAAAGGCCAACTAGGGGGCCTAGAAGGGTTGAGACAAAA 6858 || || | || ||||| ||||| || |||| |||||| | |||||| | ||| |||| Sbjct 43908 AACTGATAGGTTGGTGTGCTGGAATGGACAACGAGGGGGTTTGGAAGGGCTAAGATAAAA 43967 Query 6859 AGGATGGACTAT 6870 ||| ||| |||| Sbjct 43968 AGGTTGGTCTAT 43979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35559961184320