Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_025391.1
Length=11156
Score E
Sequences producing significant alignments: (Bits) Value
seq40018 100 2e-17
>seq40018
Length=56561
Score = 100 bits (110), Expect = 2e-17
Identities = 286/432 (66%), Gaps = 12/432 (3%)
Strand=Plus/Plus
Query 6447 GAGAATATTTTGTAATCACCGAGTGGCTTATCAAACAACACTTCCTACCTTTATTTGAGG 6506
|||||||||||||||||||||||| || || ||| ||||| || | | || | |
Sbjct 43552 GAGAATATTTTGTAATCACCGAGTACCTGATTAAAACACACTATGTATCCCTGTTAAAAG 43611
Query 6507 GACTCACTATGGCAGATGATCTGAACACCGTGATTACTAAGATGATAAACAAAACAACAG 6566
| |||||||||||||||||||| | ||| ||| || |||||||| ||| | ||||| |
Sbjct 43612 GTCTCACTATGGCAGATGATCTAACCACACTGACAACAAAGATGATGAACTACACAACGG 43671
Query 6567 GTCATGACC--ATTCATCTTGTACAGAGTTAATCACTATCTGCAACCATC---TGGACTA 6621
| || || | | | || || || || | | ||| |||| ||| | |||||
Sbjct 43672 GACAGGATCTAAATAATTATGATCA-TGTCAGTAGATAT-AGCAA--ATCTAATAGACTA 43727
Query 6622 TGAAAAGTGGAATAACAATCAACGTGGGAAATCTAATGATCCTGTATTTAAAGTAATGGG 6681
|| || ||||| || |||||| | | |||| || || | || |||||| |
Sbjct 43728 GGAGAAATGGAACAATAATCAAAGGAGACAATCCAACAGTCTGATCTTCCGTGTAATGAG 43787
Query 6682 GCAGTTTTTGGGTTACCCTAACTTGATTACTCGTACTCATGAAGTTTTTGAGAAATCATT 6741
||| ||||| | || || || ||| | || || ||| | |||||||| ||
Sbjct 43788 TGCGTTCTTGGGGTGTCCGAATTTAATTGAGAGGACACACGAATTCTTTGAGAAGAGTTT 43847
Query 6742 CATATATTTTGTCAACAGACCCGACATGAT--GGTAAGCAACGGAACTGATATCGCGAGC 6799
|| || | || | | | ||| || |||| || || | || || ||| |
Sbjct 43848 GATTTACTATGCCGATAAACCTGATCTGATGAGGGTAGAAGATGATATGCTATTCAACTC 43907
Query 6800 AA-AGACAAATTAGTGTGTTGGAAAGGCCAACTAGGGGGCCTAGAAGGGTTGAGACAAAA 6858
|| || | || ||||| ||||| || |||| |||||| | |||||| | ||| ||||
Sbjct 43908 AACTGATAGGTTGGTGTGCTGGAATGGACAACGAGGGGGTTTGGAAGGGCTAAGATAAAA 43967
Query 6859 AGGATGGACTAT 6870
||| ||| ||||
Sbjct 43968 AGGTTGGTCTAT 43979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35559961184320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |