Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_028246.1 Length=14627 Score E Sequences producing significant alignments: (Bits) Value seq57646 100 3e-17 >seq57646 Length=1202957 Score = 100 bits (110), Expect = 3e-17 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 9698 aaaTTGGCCTGAATTTTTAAAAGAAATTAATGATCACGGTTTGGAGTGGGAAAAACTGGT 9757 ||||||| ||||| | || | || |||||| || || |||| || | | || Sbjct 1171178 AAATTGGAAGGAATTCCTCAAGAAGATAAATGATTTTGGATTAGAGTTAGAGCATTTAGT 1171119 Query 9758 AATAGGACTAAAAGCTAAAGAGAGAGAATTAAAGATAGAAGGTAGAtttttttCATTGAT 9817 ||||| |||| || ||||| |||||| |||| | | ||||||||| || || |||| Sbjct 1171118 TATAGGTCTAAGAGGGAAAGAAAGAGAAATAAAAAGATTAGGTAGATTCTTCTCTCTGAT 1171059 Query 9818 GTCATATGACATGAGGGATTACTTCGTAATGACTGAATATTTGATaaaaaaaTATTATGT 9877 | ||| | | ||||||||||| ||||| || || ||| | || |||| | ||| | Sbjct 1171058 GACATGGCAACTCAGGGATTACTTTGTAATAACAGAGTATCTTATTAAAATTCACTATAT 1170999 Query 9878 ACCATTATTCAAAGGATTGACCATGGCTGATGATCAAAATACAGT 9922 ||| |||| ||| || || ||||| |||||| |||| |||| Sbjct 1170998 TCCACTATTTTCAGGGTTAACTATGGCCGATGATTTAAATTCAGT 1170954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46655583748330