Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_031079.1
Length=11843
Score E
Sequences producing significant alignments: (Bits) Value
seq57646 78.8 7e-11
>seq57646
Length=1202957
Score = 78.8 bits (86), Expect = 7e-11
Identities = 118/165 (72%), Gaps = 2/165 (1%)
Strand=Plus/Minus
Query 6787 GGGAAGGAAAGGGAGATCAAGAAGAATGGG-AGGTTCTTCGCACTCATGTCCTGGGACCT 6845
||||| ||||| || || || |||| | || || |||||| | || ||| | ||| | ||
Sbjct 1171105 GGGAAAGAAAGAGAAATAAA-AAGATTAGGTAGATTCTTCTCTCTGATGACATGGCAACT 1171047
Query 6846 TCGGGAGTACTTTGTATCCACTGAATATCTTATTAAAATGTTCTATGTCCCTTTGTTCCA 6905
|||| ||||||||| || || |||||||||||||| |||| | || | ||
Sbjct 1171046 CAGGGATTACTTTGTAATAACAGAGTATCTTATTAAAATTCACTATATTCCACTATTTTC 1170987
Query 6906 AGGTCTGACCATGGCGGATGATCTGAACTCTGTCACCAAAAAGAT 6950
||| | || ||||| |||||| | || || || | ||||||||
Sbjct 1170986 AGGGTTAACTATGGCCGATGATTTAAATTCAGTTATGAAAAAGAT 1170942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 37756876052452
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |