Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_031079.1 Length=11843 Score E Sequences producing significant alignments: (Bits) Value seq57646 78.8 7e-11 >seq57646 Length=1202957 Score = 78.8 bits (86), Expect = 7e-11 Identities = 118/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 6787 GGGAAGGAAAGGGAGATCAAGAAGAATGGG-AGGTTCTTCGCACTCATGTCCTGGGACCT 6845 ||||| ||||| || || || |||| | || || |||||| | || ||| | ||| | || Sbjct 1171105 GGGAAAGAAAGAGAAATAAA-AAGATTAGGTAGATTCTTCTCTCTGATGACATGGCAACT 1171047 Query 6846 TCGGGAGTACTTTGTATCCACTGAATATCTTATTAAAATGTTCTATGTCCCTTTGTTCCA 6905 |||| ||||||||| || || |||||||||||||| |||| | || | || Sbjct 1171046 CAGGGATTACTTTGTAATAACAGAGTATCTTATTAAAATTCACTATATTCCACTATTTTC 1170987 Query 6906 AGGTCTGACCATGGCGGATGATCTGAACTCTGTCACCAAAAAGAT 6950 ||| | || ||||| |||||| | || || || | |||||||| Sbjct 1170986 AGGGTTAACTATGGCCGATGATTTAAATTCAGTTATGAAAAAGAT 1170942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37756876052452