Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_031282.1
Length=12651
Score E
Sequences producing significant alignments: (Bits) Value
seq57646 143 2e-30
seq40018 113 4e-21
>seq57646
Length=1202957
Score = 143 bits (158), Expect = 2e-30
Identities = 371/556 (67%), Gaps = 16/556 (3%)
Strand=Plus/Minus
Query 7375 GATCAACATACAAAGAAGAAAAAATGGTTTGTAGATGATACACAAGTC--CCAGTTGATA 7432
|||||| || || ||||||||||||||||| || || | || || ||| |||
Sbjct 1171489 GATCAATTTAAAAGAAAGAAAAAATGGTTTGTCAAT-AT-CGCAGGTATTCCAAGAGATC 1171432
Query 7433 GTTTACTGTATCCCCACATATTACACAACACTTGGCCAACTC---CTCACATCATTGAAC 7489
| |||| ||| |||||| | || || |||||||||| |||| || ||||
Sbjct 1171431 ATGTACTCTATGACCACATTAAGAATAATACATGGCCAACTCATTCTCAAATAGTTGAT- 1171373
Query 7490 AATTTGGGGATCACTGGCATGAATTGCCAATTAT-TAAGTGTTTCGATATCCCCGATGTG 7548
||||| || | ||||||||| | || |||| ||| || || || || ||||||||
Sbjct 1171372 --TTTGGTGACCGATGGCATGAACTACCG-TTATCTAAATGCTTTGAGATACCCGATGTA 1171316
Query 7549 ATTGATCCATCATTGATATATTCTGATAAGAGTCATTCAGTCACACGGTCTGAATTAAAA 7608
|| ||||| || || ||||| ||||| ||||| || || || ||||||||
Sbjct 1171315 ATAGATCCTAGTTTAATTTATTCAGATAAAAGTCACTCTTATACTTTTTCAGAATTAAAG 1171256
Query 7609 GAACATATAGCTAAATCACCGTACAAACCCGTGTCAAATCCAAAAGTTTTGAAATCTTTA 7668
|| ||||| || || || | | ||| || || || || || | || | ||
Sbjct 1171255 GAGCATATCTTAAAGTCTCCCAATACACCTGTCCCATCTCATAAGGTACTCAAGACATTC 1171196
Query 7669 TTAACTAAACCG--GCTACTGATTGGCCCTCATTTCTGGAATCAATTGATAAGTACGGAT 7726
| |||| | || || ||||| ||| || | || || | | ||||
Sbjct 1171195 CTTC--AAACAGAAGCCACAAATTGGAAGGAATTCCTCAAGAAGATAAATGATTTTGGAT 1171138
Query 7727 TAGATCTGGAATATTTAATCATTGGATTAAAGGAGAAAGAGCGAGAAATCAAGAAAGACG 7786
|||| | || ||||| | || || ||| | |||||| ||||||| || | | |
Sbjct 1171137 TAGAGTTAGAGCATTTAGTTATAGGTCTAAGAGGGAAAGAAAGAGAAATAAAAAGATTAG 1171078
Query 7787 GGAGATTCTTCTCTCTTATGTCGTGGCAACTCAGGGATTACTTTGTAATAACCGAATATT 7846
| |||||||||||||| ||| | ||||||||||||||||||||||||||||| || |||
Sbjct 1171077 GTAGATTCTTCTCTCTGATGACATGGCAACTCAGGGATTACTTTGTAATAACAGAGTATC 1171018
Query 7847 TGATCAAGCAACACTTTGTCCCATTATTCGACGGTTTGACTATGGCAGATGATCTCACGA 7906
| || || |||| | | ||| |||| || || |||||||| |||||| | |
Sbjct 1171017 TTATTAAAATTCACTATATTCCACTATTTTCAGGGTTAACTATGGCCGATGATTTAAATT 1170958
Query 7907 CTGTTATCAAGAAAAT 7922
| ||||| || || ||
Sbjct 1170957 CAGTTATGAAAAAGAT 1170942
>seq40018
Length=56561
Score = 113 bits (124), Expect = 4e-21
Identities = 284/426 (67%), Gaps = 8/426 (2%)
Strand=Plus/Plus
Query 7819 AGGGATTACTTTGTAATAACCGAATATTTGATCAAGCAACACTTTGTCCCATTATTCGAC 7878
|| || || |||||||| ||||| || |||| || ||||| ||| | | || |
Sbjct 43551 AGAGAATATTTTGTAATCACCGAGTACCTGATTAAAACACACTATGTATCCCTGTTAAAA 43610
Query 7879 GGTTTGACTATGGCAGATGATCTCACGACTGTTATCAAGAAA-ATGATGGACAACGCAAA 7937
||| | ||||||||||||||||| || || | | ||| ||| |||||| || || |||
Sbjct 43611 GGTCTCACTATGGCAGATGATCTAACCACACTGA-CAACAAAGATGATGAACTACACAAC 43669
Query 7938 TGGTCAAGGAT-TAGATACCTATGATTAT----ATATCCATAGCCAATCATATAGATTAT 7992
|| | ||||| || ||| |||||| || || ||||| |||| ||||| ||
Sbjct 43670 GGGAC-AGGATCTAAATAATTATGATCATGTCAGTAGATATAGCAAATCTAATAGACTAG 43728
Query 7993 GAAAAGTGGAATAATCATCAGAGGAAAGAATCCACTACCCCAGTATTTAAGGTAATGGGT 8052
|| || ||||| ||| |||| |||| | |||||| | | | || |||||| ||
Sbjct 43729 GAGAAATGGAACAATAATCAAAGGAGACAATCCAACAGTCTGATCTTCCGTGTAATGAGT 43788
Query 8053 CAATTCCTAGGTTACCCTAACCTTATTAGCCGAACTCACGAATTCTTCGAAAGGAGTTTA 8112
||| | || | || || | ||| | || ||||||||||| || | ||||||
Sbjct 43789 GCGTTCTTGGGGTGTCCGAATTTAATTGAGAGGACACACGAATTCTTTGAGAAGAGTTTG 43848
Query 8113 ATTTACCATGGCGGGAGAACAGACCTAATGAGGATCGTCAATGGTGAAGTAGAAAATAAT 8172
|||||| ||| || | | | || || |||||| | | ||| | || ||
Sbjct 43849 ATTTACTATGCCGATAAACCTGATCTGATGAGGGTAGAAGATGATATGCTATTCAACTCA 43908
Query 8173 TCGGATATCCGAGTATGTTGGAATGGACAGAAAGGAGGTCTGGAAGGATTGAGACAGAAA 8232
| |||| || || ||||||||||| ||| ||| ||||||| | ||| | |||
Sbjct 43909 ACTGATAGGTTGGTGTGCTGGAATGGACAACGAGGGGGTTTGGAAGGGCTAAGATAAAAA 43968
Query 8233 GGTTGG 8238
||||||
Sbjct 43969 GGTTGG 43974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40340729347140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |