Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_031302.1
Length=11370
Score E
Sequences producing significant alignments: (Bits) Value
seq40018 113 3e-21
>seq40018
Length=56561
Score = 113 bits (124), Expect = 3e-21
Identities = 292/434 (67%), Gaps = 17/434 (4%)
Strand=Plus/Plus
Query 6496 TAAGGGATTATTTTGTAATGACTGAGTACTTGATTAAAACACACTTTGTTCCTCTATTTG 6555
|||| || ||||||||||| || |||||| ||||||||||||||| ||| | || ||
Sbjct 43549 TAAGAGAATATTTTGTAATCACCGAGTACCTGATTAAAACACACTATGTATCCCTGTTAA 43608
Query 6556 ATGGACTCACAATGGCAGATGACTTAACAACGGTAATCGGGAAAATTCTTCGAA--ACAC 6613
| || ||||| ||||||||||| |||| || | | || || | ||| ||||
Sbjct 43609 AAGGTCTCACTATGGCAGATGATCTAACCACACTGACAACAAAGATGAT--GAACTACAC 43666
Query 6614 GGAAGGACAAGGAGATACAT-CCTATGAAAATGTGA----CTTTTGCTGATCATATTGAT 6668
|||| |||| || || ||||| |||| | | | || ||| || ||
Sbjct 43667 AACGGGAC-AGGATCTAAATAATTATGATCATGTCAGTAGATATAGCAAATCTAATAGAC 43725
Query 6669 TATGAAAAATGGAATAATCACCAAAGAGCAGAGGGAAACAACCCTACCTTCAGGGTTATG 6728
|| || |||||||| ||| | ||||| | | |||| | | |||| | || |||
Sbjct 43726 TAGGAGAAATGGAACAATAATCAAAGGAGACAATCCAACAGTCTGATCTTCCGTGTAATG 43785
Query 6729 GGTCAATTTTTAGGGTACCCAAATTTGATTGAAAGAACACATGAAATCTTTGAAAAATCT 6788
|| || || |||| || ||||| ||||| || ||||| ||| ||||||| || |
Sbjct 43786 AGTGCGTTCTTGGGGTGTCCGAATTTAATTGAGAGGACACACGAATTCTTTGAGAAGAGT 43845
Query 6789 TGGATATACTATAATCGA-AGAGGAGATTTGATTGGGGTAGACGACAATGATAAGCTGTA 6847
| ||| |||||| ||| | | ||| |||| ||||||| | |||||| ||| |
Sbjct 43846 TTGATTTACTAT-GCCGATAAACCTGATCTGATGAGGGTAGAAG---ATGATATGCTATT 43901
Query 6848 CAAC-AAAGGGCCACACAGAGTTTGTTGGAATGGACAAAGAGGAGGACTGGAAGGTCTTC 6906
|||| || | | | || || |||||||||||| |||| || ||||||| ||
Sbjct 43902 CAACTCAACTGATAGGTTG-GTGTGCTGGAATGGACAACGAGGGGGTTTGGAAGGGCTAA 43960
Query 6907 GTCAAAAAGGGTGG 6920
| ||||||| |||
Sbjct 43961 GATAAAAAGGTTGG 43974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36244298566824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |