Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_031304.1 Length=10306 Score E Sequences producing significant alignments: (Bits) Value seq57646 89.7 3e-14 >seq57646 Length=1202957 Score = 89.7 bits (98), Expect = 3e-14 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 5305 TATCGGGCTGAAAGGGAAAGAAAGAGAACTAAAGGAAATAGGAAGGTTCTTTTCTTTAAT 5364 ||| || || | |||||||||||||||| |||| | |||| || ||||| ||| | || Sbjct 1171118 TATAGGTCTAAGAGGGAAAGAAAGAGAAATAAAAAGATTAGGTAGATTCTTCTCTCTGAT 1171059 Query 5365 GACATGGGCTCTAAGGGAATATTTCGTCTCTACTGAGTATTTGATCAAAACTTACTTCGT 5424 ||||||| || ||||| || || || || |||||| | || |||| | ||| | Sbjct 1171058 GACATGGCAACTCAGGGATTACTTTGTAATAACAGAGTATCTTATTAAAATTCACTATAT 1170999 Query 5425 TCCATTATTTGAGGGACTCACTATGGCTGATGAT 5458 |||| ||||| || | |||||||| |||||| Sbjct 1170998 TCCACTATTTTCAGGGTTAACTATGGCCGATGAT 1170965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32841798683720