Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_031690.1 Length=11308 Score E Sequences producing significant alignments: (Bits) Value seq57646 87.8 1e-13 >seq57646 Length=1202957 Score = 87.8 bits (96), Expect = 1e-13 Identities = 289/441 (66%), Gaps = 14/441 (3%) Strand=Plus/Plus Query 4691 ATTTTCTTTATGACGGTAGTCATATCATCTGCCATAGTTAGTCCTTTAAACAATGGAACA 4750 || || || || || | | | | |||||| |||||||||| ||| ||| | ||||| | Sbjct 1170942 ATCTTTTTCATAACTGAATTTAAATCATCGGCCATAGTTAACCCTGAAAATAGTGGAATA 1171001 Query 4751 AAGTGAGTCTTGATTAGGTGTTCTGTTATTACAAAATACTCTCGTAAAGCCCAGGTCAAT 4810 ||||| | || || || | |||||||||||||| || || | | ||| |||| Sbjct 1171002 TAGTGAATTTTAATAAGATACTCTGTTATTACAAAGTAATCCCTGAGTTGCCATGTCATC 1171061 Query 4811 AGAGCATAAAATCTTCCTCCAATC--TTGATCTCTCGCTCTTTTCCTTTAAGTCCTATGA 4868 |||| | ||||| ||| |||| || || |||| ||||| ||| | || ||||| | Sbjct 1171062 AGAGAGAAGAATCTACCT--AATCTTTTTATTTCTCTTTCTTTCCCTCTTAGACCTATAA 1171119 Query 4869 TGAGATCCTCAAGAGTTAGTCCATTGTCATTGA-CTTCTTGCAGGAACTTTTTCCACTCC 4927 | || ||| | || |||| ||||| | ||||||| ||||| | ||||| | Sbjct 1171120 CTAAATGCTCTAACTCTAATCCAAAATCATTTATCTTCTTG-AGGAATTCCTTCCAATTT 1171178 Query 4928 GTTGCAGGTTTTTGGAGAAATGATTCCAGAACTTTATTTGTTGGGATTGG-GTCATGGGA 4986 || || | |||| || |||| | || || |||| | ||||| || || ||||| Sbjct 1171179 GTGGCTTCTGTTTGAAGGAATGTCTTGAGTACCTTATGAGATGGGACAGGTGTATTGGGA 1171238 Query 4987 ACGTGTCAGA-ATGTGTCTATAGACCT--CAGAGTATTGCATAGAATGGCTCTTGTCACT 5043 | | ||| ||| || || || | ||||| ||| || || || || Sbjct 1171239 GACTTTAAGATATGCTCCTTTAATTCTGAAAAAGTAT----AAGAGTGACTTTTATCTGA 1171294 Query 5044 ATAGATAACGGATGGATCAATGACATCGGGAATCTCCATACATTTTTGAAGCGGTAATCT 5103 ||| || | ||||| || |||||||| ||||| | ||||| | ||||| | Sbjct 1171295 ATAAATTAAACTAGGATCTATTACATCGGGTATCTCAAAGCATTTAGATAACGGTAGTTC 1171354 Query 5104 ATGCCAGTTGTCTCCAAAATC 5124 |||||| ||| |||||||| Sbjct 1171355 ATGCCATCGGTCACCAAAATC 1171375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36046032596192