Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_031955.1 Length=11931 Score E Sequences producing significant alignments: (Bits) Value seq28589 80.6 2e-11 >seq28589 Length=6593 Score = 80.6 bits (88), Expect = 2e-11 Identities = 149/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 7721 ATCGAAGAGGGGGCAGGAAAACTCGGTCTAATTATTAAAAAAGAAGAGACTATGTGTAGT 7780 ||||||||| | || | ||| | ||||| || || || | ||| || |||||| | | Sbjct 2140 ATCGAAGAGAGAGCGAGGAAATTAGGTCTTATAATCAACAGAGATGAAACTATGCGATCT 2199 Query 7781 TTTGACTTCTTGATATATGG-AAAGACTCCTTTATTTAGAGGCAATATCTTGGTTCCAGA 7839 || ||| ||| ||||| |||| | ||| ||||| |||| || || || ||| Sbjct 2200 GCAGATTTCCTGAGTTATGGGAAAGTC-CCTGTATTTCGAGGAAACATTAGGGGATTAGA 2258 Query 7840 GTCTAAAAGGTGGGCAAGAGTGTCTTGTATTTCCAATGATCAAATTATCAGTTTGGCGAA 7899 | ||||||| ||| || |||| |||| | |||||||||||| | | | || | ||| Sbjct 2259 GACTAAAAGATGGTCACGAGTCACTTGCGTGTCCAATGATCAACTGCCCGGATTAGGGAA 2318 Query 7900 CATAATGTCTACTGTCTCCACGAATGCACTGACTGT 7935 || |||| ||||| || | ||||| |||| || Sbjct 2319 TATCTTGTCGACTGTATCTTCAAATGCCTTGACAGT 2354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38038285817220