Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_030697.1 Length=9808 Score E Sequences producing significant alignments: (Bits) Value seq2179194 82.4 5e-12 seq1834025 82.4 5e-12 seq901610 82.4 5e-12 seq499350 82.4 5e-12 seq2640172 78.8 6e-11 seq2150749 78.8 6e-11 seq2027504 78.8 6e-11 seq1691247 78.8 6e-11 seq1561716 78.8 6e-11 seq1509035 78.8 6e-11 seq1383814 78.8 6e-11 seq1334087 78.8 6e-11 seq1271766 78.8 6e-11 seq1267097 78.8 6e-11 seq1088757 78.8 6e-11 seq1004248 78.8 6e-11 seq915373 78.8 6e-11 seq886876 78.8 6e-11 seq819757 78.8 6e-11 seq660011 78.8 6e-11 seq651876 78.8 6e-11 seq601181 78.8 6e-11 seq280600 78.8 6e-11 seq262154 78.8 6e-11 seq174693 78.8 6e-11 seq134799 78.8 6e-11 >seq2179194 Length=888 Score = 82.4 bits (90), Expect = 5e-12 Identities = 70/85 (82%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 9652 CGCGTGAGTGAGGGGGATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGT 9711 || |||| || | | |||||||||||||||||| ||| || |||||| ||| ||| ||| Sbjct 803 CGTGTGACTGTGTGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGT 862 Query 9712 CGCCGGATCCTTaaaaaaaaCAAGA 9736 ||||| ||| |||||||||| |||| Sbjct 863 CGCCGTATCATTAAAAAAAA-AAGA 886 >seq1834025 Length=638 Score = 82.4 bits (90), Expect = 5e-12 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 ||||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 569 GATCGGAAGAGCGTCGTGGAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 628 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 629 AAAAAAAA 636 >seq901610 Length=404 Score = 82.4 bits (90), Expect = 5e-12 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||||||| ||||| Sbjct 338 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGGATCATTAAA 397 Query 9727 aaaaa 9731 ||||| Sbjct 398 AAAAA 402 >seq499350 Length=353 Score = 82.4 bits (90), Expect = 5e-12 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 277 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 336 Query 9727 aaaaaCAAGA 9736 ||||| |||| Sbjct 337 AAAAAAAAGA 346 >seq2640172 Length=2000 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 1929 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 1988 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 1989 AAAAAAAA 1996 >seq2150749 Length=858 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 789 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 848 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 849 AAAAAAAA 856 >seq2027504 Length=753 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 685 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 744 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 745 AAAAAAAA 752 >seq1691247 Length=578 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 511 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 570 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 571 AAAAAAAA 578 >seq1561716 Length=535 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 467 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 526 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 527 AAAAAAAA 534 >seq1509035 Length=520 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 453 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 512 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 513 AAAAAAAA 520 >seq1383814 Length=489 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 421 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 480 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 481 AAAAAAAA 488 >seq1334087 Length=478 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 409 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 468 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 469 AAAAAAAA 476 >seq1271766 Length=465 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 395 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 454 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 455 AAAAAAAA 462 >seq1267097 Length=464 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 397 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 456 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 457 AAAAAAAA 464 >seq1088757 Length=432 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 354 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 413 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 414 AAAAAAAA 421 >seq1004248 Length=419 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 347 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 406 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 407 AAAAAAAA 414 >seq915373 Length=406 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 336 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 395 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 396 AAAAAAAA 403 >seq886876 Length=402 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 330 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 389 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 390 AAAAAAAA 397 >seq819757 Length=392 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| | ||| Sbjct 325 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATAAAA 384 Query 9727 aaaaaCAA 9734 |||||||| Sbjct 385 AAAAACAA 392 >seq660011 Length=372 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 305 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 364 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 365 AAAAAAAA 372 >seq651876 Length=371 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 299 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 358 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 359 AAAAAAAA 366 >seq601181 Length=365 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 297 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 356 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 357 AAAAAAAA 364 >seq280600 Length=329 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9664 GGGGATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTT 9723 || |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| || Sbjct 257 GGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATT 316 Query 9724 aaaaaaaa 9731 |||||||| Sbjct 317 AAAAAAAA 324 >seq262154 Length=327 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 238 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 297 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 298 AAAAAAAA 305 >seq174693 Length=318 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 248 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 307 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 308 AAAAAAAA 315 >seq134799 Length=314 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 243 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGAATCATTAAA 302 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 303 AAAAAAAA 310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30302721524096