Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_014791.1 Length=9070 Score E Sequences producing significant alignments: (Bits) Value seq276 78.8 5e-11 >seq276 Length=185278 Score = 78.8 bits (86), Expect = 5e-11 Identities = 106/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 7323 GAAGATACATGTCTCTGCTTTAATGCTTTCAATGGACTTCCTGGGCCATACATAAAATGG 7382 |||||||| ||| | || |||||||| | || |||||||| ||||| ||||| |||||| Sbjct 89747 GAAGATACTTGTTTATGTTTTAATGCGATGAAGGGACTTCCAGGGCCCTACATCAAATGG 89688 Query 7383 TTTTTAAAAGAATTGGGTCTTGAAGGTGTTGTTAAAATGCTGTCAGCATTTGGAGATAAA 7442 ||||| | || | || | |||||| || || ||||| | | || | ||| ||| Sbjct 89687 TTTTTGGACAAACTAGGCCCAGAAGGTCTTTATACGATGCTAACTGGATGGGAAGACAAA 89628 Query 7443 TCAGCGTACGCACTATGCACATTCGCAT 7470 || || | ||| | || || || |||| Sbjct 89627 TCTGCTCAAGCAATCTGTACTTTTGCAT 89600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28908157357376