Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_022580.1 Length=12676 Score E Sequences producing significant alignments: (Bits) Value seq40 96.9 3e-16 >seq40 Length=949583 Score = 96.9 bits (106), Expect = 3e-16 Identities = 152/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 7759 GATTTTTCTCTTTAATGTCATGGGAATTACGGGAATATTTTGTTGTAACAGAATACTTAA 7818 |||| || ||| ||||| ||| | || | || |||||||| | || || || |||| Sbjct 1663 GATTCTTTTCTCTAATGAGTTGGCGACTAAGAGAGTATTTTGTAATTACGGAGTATTTAA 1722 Query 7819 TTAAAGAGCATTTTGTTCCATTGTTCCATGGATTAACGATGGCAGATGATTTAACCACTG 7878 ||||| | |||| |||||| | ||| | || | || ||||||||||||||||| ||| Sbjct 1723 TTAAATAACATTATGTTCCCCTTTTCAAAGGGATTACAATGGCAGATGATTTAACAACTT 1782 Query 7879 TGATGAAAAAGATGCTGGACAATACAATCGGCCAAGG--TGGCAAGGACTACACACAAAT 7936 ||| || || ||||||| | | || || ||||| |||| |||||| || Sbjct 1783 TGACAAAGAAATTGCTGGATACTTCATCAGGTCAAGGTCTGGC--TGACTACGGGATCAT 1840 Query 7937 TTGCATAGCCAATCACTTTGATTATGAGAAATGGAA 7972 | ||||| ||| | | |||||||| |||||||| Sbjct 1841 CTCTATAGCTAATGATATAGATTATGAAAAATGGAA 1876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40446881966720