Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_022581.1 Length=11806 Score E Sequences producing significant alignments: (Bits) Value seq18 80.6 2e-11 >seq18 Length=5623067 Score = 80.6 bits (88), Expect = 2e-11 Identities = 101/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 6850 GGTTCTTTTCTCTAATGTCCTGGGAATTGAGGGAGTATTTTGTAATAACTGAATACCTGA 6909 ||||||| ||||| ||| |||| | || ||||||||||| ||||| |||||||||| Sbjct 2777390 GGTTCTTCTCTCTCATGAGCTGGAGGCTAAGAGAGTATTTTGTGATAACCGAATACCTGA 2777331 Query 6910 TCAAAACTCATTACGTCCCTCTCTTTAAAGGATTGACCATGGCAGATGACATGACGGAGG 6969 | ||| || | || || | || || ||| | ||||||||||||||| | || Sbjct 2777330 TAAAATTGCACTTTGTGCCATTATTCAAGGGAATCACCATGGCAGATGACTTAACTACAC 2777271 Query 6970 TCGTCAAGAAGATGTTAGA 6988 || | |||||| | ||||| Sbjct 2777270 TCATAAAGAAGCTTTTAGA 2777252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37662958919960