Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_001560.1 Length=11161 Score E Sequences producing significant alignments: (Bits) Value seq103782 122 6e-24 seq103783 120 2e-23 >seq103782 Length=291 Score = 122 bits (134), Expect = 6e-24 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 6047 GATTTTGGAGATAAATGGCATGAACTTCCGCTGATTAAATGTTTTGAAATACCCGACTTA 6106 || || |||||| | |||||||| | || | | | ||||||||| || || || | Sbjct 22 GACTTCGGAGATCACTGGCATGAGTTACCTTTAACTGCATGTTTTGAGATTCCTGATATG 81 Query 6107 CTAGACCCATCGATAATATACTCTGACAAAAGTCATTCAATGAATAGGTCAGAGGTGTTG 6166 |||| ||||| |||||||| || || ||||||||||| ||| | ||||||||| ||| Sbjct 82 ATAGATCCATCAATAATATATTCAGATAAAAGTCATTCTATGGACCAGTCAGAGGTATTG 141 Query 6167 AAACATGTCCGAATGAATCCGAACACTCCTATCCCTAGTAAAAAGGTGTTGCAGACTATG 6226 |||||| | || | ||||||| | ||| | || |||||||||| || | | Sbjct 142 AAACATATAAAAACGTATCCGAATAAACCTGTACCATCAAAAAAGGTGTAAGAGTCATTA 201 Query 6227 TTGGACACAAAGGCTACCAATTGGAAAGAATTTCTTAAAGAGATTGATGA 6276 || | | | | ||| ||||||||||||||||| ||||| || ||||| Sbjct 202 TTAAAGAAATTAGATACTAATTGGAAAGAATTTCTCAAAGAAATAGATGA 251 >seq103783 Length=304 Score = 120 bits (132), Expect = 2e-23 Identities = 208/299 (70%), Gaps = 10/299 (3%) Strand=Plus/Plus Query 6361 AATGTCTTGGAAATTGCGAGAATACTTTGTAATTACCGAATATTTGATAAAGACTCATTT 6420 |||||| |||| ||| ||||||| ||||| | || |||||| | || || || ||||| Sbjct 1 AATGTCATGGAGGTTGAGAGAATATTTTGTTGTCACTGAATATCTAATTAAAACGCATTT 60 Query 6421 CGTCCCTATGTTTAAAGGCCTGACAATGGCGGACGATCTAACTGCAGTCATTAAAAAGAT 6480 ||||| | || | ||| |||||||||| || ||| | | | || || || ||||| Sbjct 61 TGTCCCATTATTCCACGGCTTGACAATGGCCGATGATTTGAACACTGTTATCAAGAAGAT 120 Query 6481 GTTAGATTCCTCATCCGGCCAAGGAT-TGAAGTCATATGAGGCAATTTGCATAGCCAATC 6539 | | ||| | |||| || |||||| ||| | ||||| || || || ||||||| Sbjct 121 GATGGATAACACATCTGGACAAGGAAATGATGAT-TATGAAAATATATGTATTGCCAATC 179 Query 6540 ACATTGATTACGAAAAATGGAATAACCACCAA----AGGAAGTTATCAAACGGCCCAGTG 6595 | |||||||| |||||||| || || ||| | |||| || |||| | || Sbjct 180 ATGTTGATTACACTAAATGGAACAATCATCAACAGGATGAAGCTAATAAAC----CCGTT 235 Query 6596 TTCCGAGTTATGGGCCAGTTCTTAGGTTATCCATCCTTAATCGAGAGAACTCATGAATT 6654 |||| |||||||| | || ||||||| | ||| || ||||||||||||||| Sbjct 236 TTCCAAGTTATGGATAAATTTTTAGGTTTTAACAACTTGATATCGAGAACTCATGAATT 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35501051268500