Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_002526.1 Length=14900 Score E Sequences producing significant alignments: (Bits) Value seq103783 111 1e-20 >seq103783 Length=304 Score = 111 bits (122), Expect = 1e-20 Identities = 202/292 (69%), Gaps = 3/292 (1%) Strand=Plus/Plus Query 10100 TTAAGGGATTATTTTGTCTCAACGGAGTACTTAATaaaaaaaTACTTTGTGCCATTATTT 10159 || || || |||||||| || || || |||| |||| | ||||| |||||||| Sbjct 14 TTGAGAGAATATTTTGTTGTCACTGAATATCTAATTAAAACGCATTTTGTCCCATTATTC 73 Query 10160 GAAGGATTGACAATGGCTGATGACCTAAATACTGTTATCaaaaaaaTGTTAGATGTCTCT 10219 | || ||||||||||| ||||| | || ||||||||||| || ||| | ||| | | Sbjct 74 CACGGCTTGACAATGGCCGATGATTTGAACACTGTTATCAAGAAGATGATGGATAACACA 133 Query 10220 AGTGGTCAGGGAACAAGGGAATATGAATACATCACAATTGCCAATAATATTGATTATGAA 10279 ||| || |||| || |||||| | || ||||||||| || ||||||| Sbjct 134 TCTGGACAAGGAAATGATGATTATGAAAATATATGTATTGCCAATCATGTTGATTACACT 193 Query 10280 AAATGGAATAACTATCAA-AGAATTGAATCCAATGGGCCGGTGTTCACTGTGATGGGACG 10338 |||||||| || ||||| || | |||| | ||| || || ||| || |||| Sbjct 194 AAATGGAACAATCATCAACAGGA-TGAAGCTAATAAACCCGTTTTCCAAGTTATGGATAA 252 Query 10339 ATTTTTAGGCTTGCCTAATTTGTTTACTAGAACTCATGAGTT-TTTCCAAAA 10389 ||||||||| || || ||| | | ||||||||||| || |||||||| Sbjct 253 ATTTTTAGGTTTTAACAACTTGATATCGAGAACTCATGAATTCATTCCAAAA 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47425732397347