Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_017685.1 Length=14717 Score E Sequences producing significant alignments: (Bits) Value seq103783 91.5 1e-14 >seq103783 Length=304 Score = 91.5 bits (100), Expect = 1e-14 Identities = 193/284 (68%), Gaps = 8/284 (3%) Strand=Plus/Plus Query 9914 TGAGAGATTATTTTGTTATAACGGAGTATCTGATaaaaaaaTACTATGTTCCATTATTCA 9973 ||||||| ||||||||| | || || ||||| || |||| | | ||| ||||||||| Sbjct 15 TGAGAGAATATTTTGTTGTCACTGAATATCTAATTAAAACGCATTTTGTCCCATTATTCC 74 Query 9974 AAGGATTAACAATGGCTGATGACCAAAATACTGTTGTCaaaaaaaTGTTA---AAAGTAT 10030 | || || |||||||| ||||| || |||||| |||| || ||| | || || Sbjct 75 ACGGCTTGACAATGGCCGATGATTTGAACACTGTTATCAAGAAGATGATGGATAACACAT 134 Query 10031 CTAAAGGACAGGGCC-TGATTGATTACAAAGAGATTACGATCGCTAATCATTTGGATTAT 10089 || ||||| || |||| ||||| || | || || || |||||| | ||||| Sbjct 135 CT---GGACAAGGAAATGAT-GATTATGAAAATATATGTATTGCCAATCATGTTGATTAC 190 Query 10090 GAGAAGTGGAATAACTATCAAAGAAAAGAGTCCAATGGCCCTGTGTTCCGAGTCATGGGT 10149 || ||||| || ||||| | || | ||| || || |||| ||| |||| | Sbjct 191 ACTAAATGGAACAATCATCAACAGGATGAAGCTAATAAACCCGTTTTCCAAGTTATGGAT 250 Query 10150 CAATTTTTGGGCTTACCTAATTTAATAGAAAGAACTCATGAGTT 10193 ||||||| || || || || ||| ||||||||||| || Sbjct 251 AAATTTTTAGGTTTTAACAACTTGATATCGAGAACTCATGAATT 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46841805260920