Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_017714.1 Length=15867 Score E Sequences producing significant alignments: (Bits) Value seq103783 134 1e-27 seq103782 89.7 5e-14 >seq103783 Length=304 Score = 134 bits (148), Expect = 1e-27 Identities = 199/282 (71%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 11088 GTTAAGAGAGTATTTTGTATTCACAGAGTATTTGATTAAAGAACATTTTGTGCCATTATT 11147 ||| ||||| |||||||| |||| || ||| | |||||| |||||||| |||||||| Sbjct 13 GTTGAGAGAATATTTTGTTGTCACTGAATATCTAATTAAAACGCATTTTGTCCCATTATT 72 Query 11148 CAAAGGATTAACTATGGCAGATGATCTACAAACTGTAATTAAAAAGATGATTGATGTATC 11207 | | || || || ||||| |||||| | | ||||| || || |||||||| ||| | Sbjct 73 CCACGGCTTGACAATGGCCGATGATTTGAACACTGTTATCAAGAAGATGATGGATAACAC 132 Query 11208 AGCAGGACAAGGTACTGAAACCTATGAAAACATAACAATAGCGAATAATATTGACTATGA 11267 | | |||||||| | ||| |||||||| ||| || || ||| || |||| || Sbjct 133 ATCTGGACAAGGAAATGATGATTATGAAAATATATGTATTGCCAATCATGTTGATTACAC 192 Query 11268 GAAGTGGAATAATTATCAAAGATATGATTCAAATAGTGCAATTTTCACTGTCATGGGACA 11327 || ||||| ||| ||||| |||| | |||| | ||||| || |||| | Sbjct 193 TAAATGGAACAATCATCAACAGGATGAAGCTAATAAACCCGTTTTCCAAGTTATGGATAA 252 Query 11328 ATTTTTAGGGTATCCAAAGTTAATAGCAAGAACTCATGAGTT 11369 ||||||||| | | || || ||| | ||||||||||| || Sbjct 253 ATTTTTAGGTTTTAACAACTTGATATCGAGAACTCATGAATT 294 >seq103782 Length=291 Score = 89.7 bits (98), Expect = 5e-14 Identities = 161/234 (69%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 10761 TGATTTTGGAGACAACTGGCATAGACTGCCATTGATTAAATGTTTTGATATTCCTGATAT 10820 ||| || ||||| |||||||| | || || | | ||||||||| ||||||||||| Sbjct 21 TGACTTCGGAGATCACTGGCATGAGTTACCTTTAACTGCATGTTTTGAGATTCCTGATAT 80 Query 10821 GATTGACCCCAGTATAATATACAGTGATAAATCTCATTCTATTAATAGATCAGAAGTAAT 10880 ||| || || |||||||| |||||| ||||||||| | ||||| ||| | Sbjct 81 GATAGATCCATCAATAATATATTCAGATAAAAGTCATTCTATGGACCAGTCAGAGGTATT 140 Query 10881 GAAACATATTCGAGAAA---AACCAAACAAACCTATACCAACAAGAAGAGTACTGAAAAC 10937 ||||||||| | ||| | || || |||||| ||||| ||| || || | | Sbjct 141 GAAACATAT---AAAAACGTATCCGAATAAACCTGTACCATCAAAAAAGGTGTAAGAGTC 197 Query 10938 ATTATTAGAGAAACCTGCGACAATTTGGCCTGAATTTCTTAAAAAAGTCAATGA 10991 ||||||| ||||| | || | |||| |||||||| ||| || | |||| Sbjct 198 ATTATTAAAGAAATTAGATACTAATTGGAAAGAATTTCTCAAAGAAATAGATGA 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50511292730270